Cucurbita pepo subsp. pepo (vegetable marrow): 111800238
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Entry
111800238 CDS
T05351
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111800238
04121 Ubiquitin system [BR:
cpep04121
]
111800238
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111800238
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111800238
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111800238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
zf-WRNIP1_ubi
CxC4
zf-Nse
zf-RING_16
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
111800238
NCBI-ProteinID:
XP_023539608
LinkDB
All DBs
Position
LG08
Genome browser
AA seq
305 aa
AA seq
DB search
MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGANGHEYHNRRL
GLLELFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG
VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
HCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSSSGS
NNLNRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPAVHESTQHQTGYS
GWPFD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaggaacacccattggtgttacagatgtgagcagccagttcaactccgtggg
cgggacatggtttgcgctagctgtaatggaggatttgttcaagaactcgatgaaatgatg
gaaagaggtccccttgatttctttggagccaatggtcatgaataccacaatcggaggctt
ggactcctggagcttttctcaaactttatgaggcaacggttgatagacagaaatgatatg
aggggaaggttggaatctattccagatcatggttcaggatttggtccttggttgatcttt
ggtggccaaattcctgttaggttgtctggacatggtgggtttgaagccttttttaatggg
gttcctggaattggtgtgagtaggagcaatggtggtgattattttattggtcctggactt
gaagaattgtttgaacagctttcagcaaacgaccgacgcggaccacccccagcatctaga
tcttcaatcgatgcaatgcctgttgttaaaattacgcaaagacacatccgttcgaattca
cactgccctgtttgccaagataaatttgaattagggtctgaagctaggaaaatgccatgt
gaccatatgtatcattcggattgtatagttccctggcttgtccagcacaactcctgccct
gtttgccgccaagagctgcctgcacaagggtcaggtggcagccacagctcatctggaagc
aacaatcttaatcgaaacagccgagagagggagaatagtaggacaaatcaaggaaggagg
aacccattttcaagtttatggccattccgagcgtcgagttctgactcaaaccatagtgcg
accactggaagcagctcgccagccgtacatgagagcacccaacaccaaacagggtattct
ggatggcctttcgactag
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