KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111800301
Entry
111800301         CDS       T05351                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111800301
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111800301
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N Mobilization_B
Other DBs
NCBI-GeneID: 111800301
NCBI-ProteinID: XP_023539699
LinkDB
Position
LG01:9425131..9431561
AA seq 603 aa
MMEAVRLRVSFKDKDLLTESLTGLRRSWIVLKPHLRTISDLSSYILSVFHLHDACPNGLT
LSMDGFVLPPFESVCILKDKDIVRVKKKKSKAIKEFREKKLVDEGVKLLADKEFENEPDG
CESESEEDEPKATLPVKAAPVEKKVSKKRKASNITPNSKRKKTKSSRIEEFPSIIADVQP
ANKKHEERNHLKSDLPQKVVVRKNDSSRSSSECQSHSLKIIEIDGRSNNIIKSTANAERV
DQLGVGGKKVELSDTAGENKKGPSRSTRRKKAKRQWLRERAQNEEQQQQLFETSIDQGPS
HNDDVDMDEDTVPVVVKPGHIRFEPVGKVAADPAGQQKQNHFPKETLHWNGITNKKKGQK
WGKEKTPSWKRNNSNSCTDEPLQLPTTETEQPTTPAPVVGPINFDELRPCTGLPQEGDLV
AYRLIELSSTWTPEISSFRVGKVAWYDIESNRIMLVPVPEYPLPVKKEIDEDSASQLDTN
PYGEDGSLKIDFASLVDLRLIGQGNLDSSRTAVTQEITPAKQTAESSKLAHNNGDANDTK
QGNGKVSAWDEISDALSAKKAELSKDDGLNQEESSGWRSWSYRALRGSALGPTMALLRAQ
NEL
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgatggaggctgtaagactgcgagtttcgttcaaagacaaggacctactgaccgagtcg
ctcacggggttgagacggagctggattgtcctaaagcctcatctccgaactatttccgac
ctctcctcctacatcctttctgttttccatcttcatgatgcatgccccaacggtctcaca
ctttctatggatggctttgtgttacctccatttgagtcggtttgtattttgaaggataag
gacattgtcagagtgaagaagaagaaaagtaaggcaatcaaggaattcagggagaagaaa
cttgttgatgaaggagtgaagcttctggctgacaaggagtttgaaaatgaacctgatgga
tgtgagagtgaatcagaggaagatgaacctaaggcgactttgccggtgaaagctgcgcct
gtagaaaaaaaagtgtccaagaaaagaaaagcttcgaatataactcccaactcaaagagg
aagaaaactaaatcttcccgtattgaagaatttccatctatcatagctgatgttcagccc
gctaacaaaaagcacgaagaaagaaatcatctgaagtctgacctcccacaaaaggtcgta
gtaagaaaaaatgattcatccagaagttctagtgaatgtcaatcgcattcattgaagatc
attgaaattgatggaagaagcaacaatatcattaagtcaactgccaatgcagagagggtt
gatcagcttggagttggtgggaaaaaagttgagttgtccgacactgctggtgaaaataaa
aagggtcctagtagaagtactcgccgtaagaaggcaaaaaggcaatggttgagggaaaga
gctcaaaatgaagagcaacagcagcagttatttgaaacaagtattgatcaaggacctagt
cacaatgatgatgttgatatggatgaggacactgttcctgtggtagttaagccaggacac
attcgctttgagccagttggaaaagttgcggcggatccggctgggcagcaaaagcaaaac
catttccctaaggaaacattgcattggaatggcataaccaacaagaagaagggtcaaaaa
tggggcaaggagaaaactccatcttggaagaggaacaattctaacagttgtacagacgaa
cctcttcagttacctactactgaaactgagcaacctacaactccggcacctgtagttggt
cccataaattttgatgaacttagaccgtgcactggcttacctcaggaaggtgatttagtt
gcataccgtttgattgagttatcatcaacctggacacctgagatttcctccttccgagtt
ggtaaagtagcatggtacgacattgaatccaatcggattatgctagtaccggttccagaa
tacccattacctgtcaaaaaggagatagacgaggattctgcatcacaattagatacaaac
ccatatggggaagatggctctttaaagattgattttgcatctcttgttgatcttcggctt
atcgggcaaggaaacttggattcttcaagaactgcggttacccaggaaatcactcctgcc
aaacaaactgctgaaagttccaagcttgctcataacaacggagatgccaatgacactaaa
caaggtaatgggaaagtaagtgcatgggatgaaatcagcgatgctctgagtgcgaagaaa
gccgaactttctaaggatgatggtttgaatcaagaagaaagttcaggatggagatcatgg
tcctatagggcactcagaggcagcgccctcggtccaacaatggctctcttaagagctcag
aatgaactctaa

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