Cucurbita pepo subsp. pepo (vegetable marrow): 111800361
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Entry
111800361 CDS
T05351
Name
(RefSeq) novel plant SNARE 11-like
KO
K08494
novel plant SNARE
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111800361
Membrane trafficking [BR:
cpep04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
111800361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
DUF948
MCPsignal
GCIP_C
Syntaxin_2
Helo_like_N
Occludin_ELL
DUF2203
Mis12
Laminin_II
KIND
BLOC1_2
DUF6988
DUF3802
Hydro_N_hd
Vps53_N
Zw10_N
Peptidase_S46
ING
DUF5089
Motif
Other DBs
NCBI-GeneID:
111800361
NCBI-ProteinID:
XP_023539777
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Position
LG08:5448250..5452035
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AA seq
264 aa
AA seq
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MDDNLSSISEELADIEGKINDIFRALSNGFQKLEKIKDTNRKSRQLEELTDKMRDCKRLI
KEFDREVKDLEGVNDSNTNKMLSERKQSMIKELNSYVALKKQHASNLGNKRIDLFDGPGE
NYGEDNVLLASNMTNQQLIDSGNRMMDETDEAIERSKKVVQETVNVGTETAAALKAQTEQ
MSRIVNELDSIHFSLKKASKLVKELGRQIATDKCIMALLFIIVIGVIAIIIVKLVNPNNK
DIQDIPGLAPPVQTQSRRLLWNSS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttatcttcgatcagcgaggagcttgcagatatcgaggggaaaatcaat
gacatctttcgagctttatcaaatgggtttcagaagttggagaagatcaaggacacaaat
aggaagagtagacaattggaagaattgacagataagatgcgtgattgtaagaggcttatt
aaagagtttgacagagaagtcaaggatttggaaggtgtgaatgactcgaacactaataaa
atgctgagtgagagaaagcagtctatgatcaaagaattgaactcatatgttgcccttaaa
aagcagcatgcaagcaaccttggaaacaagcgtatcgacctttttgatggtcctggtgaa
aattatggggaagataatgtgttgctagcttcaaacatgacaaaccagcaattgattgat
agtggaaacaggatgatggatgagactgatgaagcaattgagaggtcaaagaaggtcgtg
caagagacggtaaacgtgggaacagagacagcagcagcactgaaggcgcagacggagcaa
atgagcaggatagtaaacgaactcgactccatacatttctcactgaagaaagcctcgaaa
ctggtgaaggaactcggtcgacaaatagcgaccgataaatgtataatggccctcctgttc
atcattgtcattggtgtcattgccatcatcattgtcaagctggtgaatccaaataacaag
gacattcaggacatcccagggctggcaccgcccgtccagacacagagtcggagactgcta
tggaattccagttaa
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integrated database retrieval system