Cucurbita pepo subsp. pepo (vegetable marrow): 111800369
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Entry
111800369 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111800369
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111800369
03036 Chromosome and associated proteins [BR:
cpep03036
]
111800369
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
111800369
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111800369
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111800369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
111800369
NCBI-ProteinID:
XP_023539790
LinkDB
All DBs
Position
LG08:5536132..5570598
Genome browser
AA seq
1834 aa
AA seq
DB search
MSNDKSFSMASVFSSLSESFRRVPPMAVPAILDCIFASTGLSPSELFDSLLENFPKNIDV
VTTKEGKLDADQCNYITSLVCALCHILKKIGADLDALKSFIWKSFVPLINKAATLNREML
NQVFGSFIDVVTETNSWPIVEATLIPFCISSAIYSPNVLQNEELDTFEGDRCSIILDSTM
KAYGFLQLPLACHVLAVMLDAVLGNRQAPQASDVVVSNGGQKAEEFTVKLIWDICNLSEQ
MLLQSSDHRSCAIHYLLPVIFEALLSHHSLEVSIQGQACNISRSRFLMKIWKCCKKLFSF
GTLERRDAYRILSLYLCFFPHNEELGVAGMCDDGEESDIADKDLWEEIKRGLVDKESLVR
KQSLHILKKALLIDGRDNASTIPNTISSEKDSNARGITKKERWANKEAKSLGVGQICSQQ
ELVTNSRQQQWEAFILLHEMLEEYGSHLVDAAWNHQMSLLLQDPISTNFDSFTSGFHQNQ
IKMSGEIFSWISILWVRGFHHENPLVRCLIMQSFLAIDWKKHVPCLKSLPESFIIGPFIE
ALNDPVQHKDFGVKGVYSSKTIEGAAHFICQYANILDAGTRVVFLQQLTSLARKKSLGRV
GLISLSECIASAASVFGLGNNSEGECFDGSSLSAQGDLIDYSLGCKMELLDDLRFVVENS
KQHFNPSYRIQVCAKALEAAASVLCTSDLAFEAVLHFISALPREATDYGGCLRGKMQNWL
LGCGKKCCSGSCCSTETKFMKSLIEFPKRFTSHNHSSDASVTYDDEELEAWESEAKRWAR
VVFLAVKEEHHLIPILTFILNRGVNICKQKSDLEGIRVKFLILIMSLVQELQLVEEKISH
CNFKYESKDEFTLSQPSDCRSYAEPTILIQKLPNLFSSLQVELVSFAAVSCSIFWSEVKS
DETILPGSVKGKLGGPSQRRLPSSIATSVLLAVTSVKAVASVLSCCRQFRIPYSNNSGIE
FLLMFLSKTVSSPVYHSENGAEICLAAYEALASVLQVLVLEFSSEALRFLHDGSTILNQG
VEGRPLLDSLVLTFHQHVNGVLDAGVLVRTRRAVLLKWKWLCLESLLSIPYRAVQSGLNL
VDNNSFLSEATLLQIFSDLVESLENAGECSILPMLRLVRLTLWLFCKGKSGLLVTSCNGV
NAEMMWRLVHSSWILHVSCNKRRVAHIAALLSSVLHSSTFSERSMHLGEGEPGPLKWFIE
KILEEGTKSPRTFRLAALHLTGMWLSHPWTIKYYVKELKLLSLYGSIAFDEDFEAELTDY
DARTEVSLLAGSPDPELTEVFINTELYARVSVAVLFHKLADLAGIVGLSNDHGSRSDAVE
SGKLFLLELLDSVVNSNDLAKELYKKHSAIHRRKVRAWQIICILSAFVCQDIVQQVTNSL
HVSLSRNNLPSVRQYLETFAISIYLKFPTLVKEQLVPILQDYTMRPQVLSSYVFIATNVI
LHATEAVQSSHLDELLPPLVPQLTSHHHSLRGFTQLLVYHVLCRFFPAVENASTANMPLE
KRCFEDLRSYLEKNPDCVRLRASMEGYIHAYNPALSVTPSGIFSSRVKDHEFECVPTSLL
EQVLNFLNDVREDLRCSMANDLAAIKNESFKTAEDYNHMDISSDINKENFTSELPVATSL
DFQKKITLSKHEKKGTDTSSSYLGSKESYKFLNEMEGEDQLLNQLLHSRSLSLEDLRTNR
QSFILVASLLDRIPNLAGLARTCEVFTASGLAIADLNVLSDKQFQLISVTAEKWVPIVEV
PVNSMKLFLEKKKREGFSILGLEQTANSVPLDQFEFPKKTVLVLGREKEGIPVDIIHILD
ACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRHH
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgacaagagtttctcgatggcttctgttttcagttcactatcagaaagcttc
cggagagtgcctccaatggcagttccagctattttggattgcatttttgcttctactggg
ttatccccatccgagctttttgattcgcttcttgaaaattttccgaaaaatattgatgtt
gtcaccacgaaggagggaaagcttgatgcggatcaatgtaattacatcacatctttggtg
tgcgcgctctgccacatacttaaaaaaattggtgctgatcttgatgctttgaagtcattt
atatggaaaagttttgttcctttgataaataaggcggctacattgaaccgggaaatgctt
aaccaggtctttggatcattcattgatgttgtcactgagacgaactcttggccaattgtc
gaagcaactctaattccgttttgtataagttcagctatttattccccgaatgtgctgcaa
aatgaagagttggacacctttgagggtgatagatgttctatcattttggactcaacaatg
aaagcctatggctttcttcaattaccattagcgtgccacgtgttggctgtaatgttagat
gctgtccttggtaatagacaagcaccacaagcatcagatgtagtggtgtcaaatgggggc
caaaaagccgaagagtttactgttaaacttatttgggatatttgcaatttatctgaacaa
atgctcttacaaagctcggatcatcgatcttgtgccattcactatcttcttccagtaatc
tttgaagcacttctttctcaccactccttagaggtctccattcaagggcaggcatgtaat
atctccaggagtcgtttcctcatgaaaatatggaaatgttgcaaaaaactattttcattt
ggaactttggagagaagagatgcctataggattttgtctctttatttatgttttttccct
cacaatgaagagcttggagttgctggaatgtgtgatgatggagaagaatctgacatagct
gataaagatttatgggaagaaattaaaagaggcttggtggacaaggagagcttggtgagg
aagcaatcactacatatattgaagaaagcactattgatagatggaagagacaatgcatca
acaattccaaacacaatttcaagtgaaaaagatagtaatgctcgaggtattacaaaaaag
gaaagatgggccaataaggaagcaaaatcactgggtgtagggcaaatttgcagccaacag
gagcttgtaacaaatagccggcagcaacagtgggaagcattcatacttctacatgaaatg
cttgaagaatatggttcacacttggttgacgctgcttggaatcaccagatgtccttgtta
ctacaagatccgatctctactaattttgacagcttcactagtggctttcatcagaaccaa
atcaaaatgtctggcgaaatctttagttggatatcaatcttatgggttcggggattccac
catgaaaatcctttagttagatgcttgatcatgcagtcctttttagccattgactggaag
aaacatgtaccctgtttaaagtcattgccagaatcttttattattggacctttcattgaa
gcactcaatgatcctgtgcagcacaaagatttcggtgtaaaaggagtttactcatccaag
acaattgaaggtgcagctcattttatatgtcaatatgcaaatattcttgatgcagggacg
agagtggtatttttgcagcagctcacatcgttggccaggaagaaatcacttggtcgagtt
gggttgatcagcctatctgaatgcattgcttcagctgcttcagtatttggactcggcaac
aatagtgaaggagagtgctttgatggttcttcactgtcagcccaaggagatttgatagat
tattctctggggtgcaaaatggaattgcttgatgatctgagatttgtggttgagaacagc
aaacaacacttcaatcctagttatcgcattcaagtttgtgcaaaagctctggaggctgct
gcttctgtcttatgtacatcggacttggcttttgaggctgttctgcattttatttcagca
ctaccacgagaggctactgactatggaggttgcttaaggggaaaaatgcaaaattggctc
ttagggtgtggtaagaagtgctgtagtggcagttgctgcagtactgagacaaagtttatg
aagagtcttattgagtttcctaaaagatttactagtcataatcattcatccgatgcttct
gttacttacgatgatgaagagttggaagcatgggaatctgaggcaaaacgatgggcaaga
gtggttttccttgcagtcaaggaggaacatcatttaatacctatactgacgtttattctc
aaccgtggtgtaaatatttgcaaacagaagagtgatttggaaggtatacgtgtgaagttt
ctaatacttatcatgagcttggttcaagaacttcaattagttgaggagaaaatttctcat
tgcaacttcaaatatgaatccaaggatgagtttaccttgtctcagccaagtgactgtcgg
agttatgcagaaccaactatcttgatccaaaaacttcccaaccttttttcgtctctacag
gtagagttggtttcttttgctgccgtgtcttgttccatattctggtccgaagtcaagtca
gatgagacaattttaccaggttctgtgaaagggaaacttggaggccccagtcaacgtcgg
ttaccatcctctattgctacttccgttctgctagctgtaacatcagtgaaggctgttgca
tctgtcttgtcatgttgcagacagtttagaatcccttattcaaataattctggtatcgaa
tttttattgatgtttttgtcgaagactgtttcatctccagtttatcactcagagaatgga
gcagaaatatgtcttgcagcatacgaagcgctagcctctgttctccaagtgctcgtgtta
gagttttcttctgaggctttaagatttctacacgatggaagtacaatccttaatcaagga
gtagaaggaagaccattgttggactctcttgttcttacttttcatcagcatgtaaatggt
gtacttgatgcgggcgttttggttcgaactagaagggcagttctactgaagtggaagtgg
ctttgcctagagtctcttttatcaattccctatcgtgctgttcaaagtggactcaattta
gtggataataactcttttttgtctgaggcaactcttctacagatatttagtgatcttgtt
gagagcctcgagaatgctggagaatgctctattttacccatgctgagattggttagattg
accttgtggctattttgcaagggaaagtctggtctgcttgttacatcgtgtaatggcgtg
aatgcagagatgatgtggcgtttggtgcattcctcttggatattgcacgtcagctgcaac
aagagaagggttgcacatattgctgcgcttctgtcttctgttctgcattcttccacattt
tctgaaaggagtatgcatttaggtgaaggtgaaccaggacctctgaaatggttcatcgag
aaaattcttgaagaaggcacaaaaagtcctcgaacatttcgtctggctgcattacatttg
accggcatgtggctcagtcatccatggaccataaagtattatgttaaagagctgaaactg
ctatcactatatggttctattgcttttgatgaagattttgaggccgaattaactgattat
gatgcacgaactgaagtatcattattggctggaagtccagaccctgagctcactgaagtg
tttatcaatacagaattgtatgcacgtgtatcagttgctgttctgtttcataaactagct
gacttggctggtattgtgggattgtctaatgaccatgggagtcgctccgatgctgttgaa
tctggaaagttgtttctgcttgaactccttgattctgtggtaaacagcaatgaccttgcg
aaggaattgtataagaagcacagtgcgatccacagacgcaaagtacgtgcttggcaaatt
atatgtattctgtccgcgtttgtctgccaagatatagttcagcaagttactaatagcttg
catgtctccctctctagaaataacctaccttcagttcgtcaatacttggaaacatttgca
atcagcatttacttgaagtttccaacattggttaaggagcaattggttcctatattacaa
gattataccatgaggcctcaggtactctcttcttatgtatttatagctacaaatgtaatc
ctccatgcaactgaagcagttcagtccagccatttggatgagttgcttcctcctcttgtt
ccacaattgacctcccatcaccacagtttacgaggttttactcagttactggtgtaccat
gttctttgtagattttttccagcagtggaaaacgcatccactgcgaatatgcctttagag
aaaagatgtttcgaagatttgagatcataccttgagaaaaatcctgactgtgttcgatta
cgggcatccatggaaggatatattcatgcctataatcctgcactatctgtcacgccatct
ggaattttctctagcagagttaaggatcatgagttcgagtgtgtcccaacatctctcttg
gagcaagttcttaacttcctaaatgatgtccgagaagatctccggtgttcaatggcaaat
gatttggcagctattaaaaatgagagcttcaaaactgctgaagattacaaccatatggac
atatcatctgacataaataaagagaattttacttccgaactgcctgtagcaacttctttg
gattttcagaaaaaaatcactctctcaaaacatgagaagaaaggcaccgatactagttcc
tcctacttgggcagcaaagaatcttacaagttccttaatgaaatggagggggaggatcag
cttcttaaccagctgctgcattccagaagtttgtcattggaagatttaagaacaaatcga
caaagctttatcctcgtagcatctctgcttgatcgcattccaaatctagctggtctggct
aggacttgtgaggtttttacggcttcaggattggctattgcagatttaaatgtactaagt
gacaaacaattccaactcatcagtgttacagcagaaaagtgggtcccaattgttgaagtc
ccagtgaacagcatgaaacttttcctggagaaaaagaaacgggaaggcttctccattttg
ggtttggaacaaacagctaacagtgttcctcttgaccagtttgaatttccgaaaaagacg
gtattggtccttggacgtgaaaaggaaggtatacccgttgacataatccatatacttgat
gcatgtgttgagattcctcaattaggagttgttagatctctgaatgttcatgttagcggt
gccattgcactctgggagtatactcgacaacaaagacaccactga
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integrated database retrieval system
