Cucurbita pepo subsp. pepo (vegetable marrow): 111800622
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Entry
111800622 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111800622
KO
K13130
gem associated protein 2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111800622
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
111800622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
111800622
NCBI-ProteinID:
XP_023540169
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Position
LG08:complement(573387..578401)
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AA seq
702 aa
AA seq
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MANGLSSGDGDGFSRKFSASEDHARSPFHPDEMKFPLIVSNPSLQCEVRMNSSSSASPEE
NAETSVEKMVVCDWISESSENGGNMGSLVDETRILDVELGEESFKVDAVHDFEMIGAVED
GNQEVAMDEVEAKDFVTIRVPSFDGNQDCAKKEIVQEVQFSTAMEADSKEAFERTEELLR
KEADTESILEMKKKLLLEELEAMLVPGEEIHLEKDNCGKTMLVDEEKISGQQNDSENTNV
LRQSHLSLGNSLKIEVIDETALVEPVHVSKIGNGEEIDISCPTRSMQINVSKSHEPERVG
KKARRSRRRTREAKISEVHWNLGNVNELDKKNAEGSKIVYSRKDMEALRFVNVSEQSRLW
EAICKELMPVVAREYSSLTSSNYPMKTGSTSGPRQHFEKGEEASSFIRDGCSESLDAEIE
DMEGDNEITNVEFPKPSCCLSVSEDSEDDKYYNSIQRPAFLVEGEPNFDSGPPEDGLEYL
RRVRWEASHIPNVAVAKVDRSNFKKERSVYMPVIPAIANCPQNLLPSKEWEDAFLADFSK
LRQVLSCPEGLMQSDFIFHEKIDSVSPDSIDQPSVILPANDIDSQPPEEPNASTSSKENS
GNNYPSLSAISKMNSVFRVSSLRKRINSLETQTTLSRTDCLWLFALSAAVDTPLDADTCA
SFRSLLRKCASLRAEKSELDDEVIMLNILATISGRYFGQSEN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgggttaagttccggcgatggtgatgggttcagtcgaaaattctctgcctct
gaggaccacgcacgatctccttttcatccggacgagatgaagtttcctttgatcgtctcg
aatccaagcctgcagtgtgaagttaggatgaacagttcgagttctgcttctccagaagag
aacgcagaaacttctgttgaaaagatggttgtctgcgattggatttctgagtcttctgaa
aatggaggaaacatgggaagtctggtggacgagactcggattcttgatgtggagctcgga
gaagaatctttcaaggtggatgctgtccatgattttgaaatgataggtgccgtggaagat
gggaatcaagaagttgcgatggatgaagtagaagcgaaagattttgtaacaattagggtt
ccgagttttgatggaaatcaagattgtgcgaagaaagaaattgttcaagaagttcagttt
tctactgctatggaagccgacagcaaagaagcctttgagcgaaccgaggaattgttgagg
aaagaagctgatactgagagcattctggagatgaaaaagaaattactattggaagaactt
gaagccatgttggttcctggagaagagattcatctagaaaaggataattgcggcaaaacg
atgcttgttgatgaggagaagatttctggtcagcaaaatgattccgagaacacgaacgtt
cttagacaaagccatttatctctcggaaattcattgaagattgaagtaatagacgaaact
gcattagttgaaccggttcatgtttccaaaattggaaatggagaagaaattgacataagt
tgtccaacaaggtcaatgcagatcaatgtgagcaaatcccatgaacctgaaagagtgggg
aaaaaggctagaagatcgaggaggagaacgagggaagcgaagatctcagaggtgcattgg
aatctggggaatgtgaatgaacttgataagaaaaatgctgaaggaagtaagatagtgtac
tcaaggaaggatatggaagcactgaggtttgtaaatgtttcagaacagagtagattgtgg
gaagctatatgcaaggaacttatgcccgttgtggcaagggaatacagtagcttaacaagc
tctaattacccaatgaagacaggctccacctctggtcctaggcagcatttcgagaaggga
gaagaagcctcttcatttataagggatggctgttcagaaagcttggatgctgagatagag
gacatggaaggtgataatgaaattacgaatgttgaattcccgaaaccctcttgctgtctt
agtgtcagtgaagatagtgaagatgataaatactacaacagtatacagagacctgccttt
ctggtggagggagagcccaattttgattcaggacctccagaagatggattagaatatctt
agacgtgtcaggtgggaagcatcccatattccaaatgtggcggtggctaaagttgataga
agtaattttaagaaagagcgaagtgtttatatgccagtgattcctgccattgccaattgc
ccccagaatttactgccttcaaaagagtgggaggatgcatttcttgctgatttttctaag
ctgcgtcaggttctgtcgtgccccgagggacttatgcagtctgatttcatcttccatgaa
aagatcgattctgtgagtccagactcgatcgatcagccgagcgttatcttgcctgccaat
gacatcgactcgcagccacccgaggaaccaaatgccagcacttcttcaaaggaaaacagt
ggcaacaactatccatctttatcagcaatttcaaagatgaactcagtgtttcgggtttct
tcgttgaggaaacgtataaactcgttagaaacacaaacaacactgtcgaggacggactgt
ctttggctgtttgcattaagtgcagcagttgatactcctctggatgcagatacttgtgct
tctttcaggagtctgcttcggaaatgtgccagtttgcgggccgagaagtcggagctcgac
gacgaggtgataatgctcaatattctagccaccatttcaggaagatacttcggacagtcg
gaaaattga
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