Cucurbita pepo subsp. pepo (vegetable marrow): 111800724
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Entry
111800724 CDS
T05351
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111800724
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111800724
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
111800724
NCBI-ProteinID:
XP_023540310
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Position
LG08:complement(8347212..8349549)
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AA seq
466 aa
AA seq
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MSSNPFSLLSSTTTPFVPHQDANPKSKPSTAAKKKRNLPGTPDPDAEVIALSPKSLMATN
RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEMIKKKVYICPEKTCVHHDPSRAL
GDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEESARITTISATNILNNLRNDSIVLHQQEQNNLESLGDVPGLSQFSNSD
NFLRDFEEHQHKNRSPLSLWLNQASVDNAMNNNNNNISHFFGASSSSSNLFGSMTESGLS
VLPVIEKEDVDNKGSLSKATAAASLLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNN
NSPLFGAGAFGVMSSSSSSLNSFNKSRSSTMADSIQMVGNNSDMSSDCLNQLLLPPNDSN
KMRSSGQTRDFLGVGGGEAPRPPFLPPELAKFAAINSTMGLSQFNH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaatcctttttctcttctctcttccactaccactccctttgttccacaccaa
gatgctaaccctaaatcgaaaccctcgaccgctgcgaagaagaaacgcaacctcccggga
accccagatccagatgctgaggttattgctttgtcgccgaaatcgctcatggcgacgaat
agattcgtatgcgaaatttgcaacaagggttttcaaagagatcagaatctacaacttcac
cgacgtgggcataaccttccgtggaagctacgacaacggacgaacaaggagatgattaag
aagaaagtgtatatttgcccggagaagacgtgtgtacatcatgatccgtcgcgagccctc
ggtgacctgaccgggataaagaaacatttcagtaggaaacatggcgagaagaagtggaaa
tgtgataagtgttctaagaaatacgcggttcaatccgattggaaagctcactccaaaacc
tgtgggactcgagaatataagtgcgattgtggaactcttttttctcggaaagacagcttc
ataacccacagagcattttgtgatgctttagctgaagaaagtgcaagaatcacaacaatt
tcagcaacaaatattctcaataatttaagaaatgattcaattgttcttcatcaacaagaa
caaaacaatcttgaatctcttggagatgttcctgggctttcccaattcagtaattcagat
aatttcttgagagattttgaagaacaccaacacaagaacagatctccattgtccctttgg
ttaaaccaagcttctgttgataatgcaatgaacaacaacaacaacaacatttcccacttt
tttggagcttcttcttcctcctccaatcttttcggatctatgaccgaaagcgggctttcg
gtcttgccggtgattgagaaggaagacgttgacaataagggaagtttgtcgaaggctacg
gcggccgcctcgttgttaggtcaatcttctcaatcgtttgtttcgtcttctccgatgtcg
gccaccgcccttctacaaaaagctgctcttatgggctcgactagaagcagcaacaataat
aattctccgctgtttggagctggcgcgttcggagtaatgagctcgtcgtcttcgtcattg
aactcgtttaataaatctagaagctcgacaatggccgactcaatacagatggtcggtaac
aactccgacatgagctcggattgtctcaaccaacttctactaccaccaaatgatagtaac
aaaatgagaagtagcggtcaaacgagggatttcctcggtgtcggaggaggagaagcgcct
cggccaccgttcctcccgccggagcttgcaaaattcgccgccataaactcgacaatggga
ctaagccaattcaaccactaa
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