Cucurbita pepo subsp. pepo (vegetable marrow): 111800927
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Entry
111800927 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111800927
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111800927
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111800927
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111800927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-C3HC4_4
zf-rbx1
zf-Nse
zf-RING_4
zf-RING_6
RING_XB3-XBAT31
zf-RING_10
Rtf2
zf-ANAPC11
LRAT
Motif
Other DBs
NCBI-GeneID:
111800927
NCBI-ProteinID:
XP_023540616
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All DBs
Position
LG08:2619278..2623652
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AA seq
370 aa
AA seq
DB search
METKIAFISIAASSSSSSSSSSSPLSRLFLLSDSSSSASPLQVSCGFSFDPPAPAAVRRS
VFRQLDGILVVEIIHRDQSMMRKGRKFFYPFNFWMFNSFIQFIVDFLGITLVVIQRFLDP
NHFAIYVDDSIVVGLKDKGKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECID
PTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRR
NGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSAL
AQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK
RDIIRIYLPF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaagattgcttttatatcgattgccgcctcctcctcctcctcctcctcctcc
tcctcctcccccctttcccgtctctttttgctctccgattcttcttcctccgcttcgcct
ctgcaagtttcttgcggtttctcgttcgatcctcccgctcctgccgctgttcgccgttcc
gtcttccgccagctggatggtattcttgtcgtcgaaatcattcaccgagatcagtcgatg
atgcgcaaaggaagaaaattcttttatccttttaatttttggatgtttaactcatttatt
caattcatcgtggacttcttgggaattacattagtggtgattcaaagatttttggacccg
aatcactttgccatttatgtggatgattctattgttgtaggtttgaaagataaaggaaag
gctgttggaatgagctttcaaagtagaaatgatctacaggaatggagtgcaagagttgtt
gagcgaggaacagtaatggacttcgacctaaattgcccacctccagatgagtgcattgat
ccaactggccctcatcaggaagcaacacagtactacaatcattaccaaggacaagctatg
gacaatcccgagtttgtcgacgaggacattgctataatctcccctaggaaatttgctgag
gccaggaagaactttagacgaaaccactttgagagtagctgtggtgttgccattagacgt
aatggtgctttctcagatttaacgagtttggccccttttacaatttggccgccccttaca
aaccgcaataacgtatctatacaagaacaaacgattcacaacttggacctttgcttaagc
tgcgaaagcagtagtaaagccacaaaggcaacaattgacacagacatcccttctgcactt
gcacaaactagcagcagcctcccacctgcagcagcctcgggtttgcggtgcgcgatctgc
atagaagcattggttgaagaaacaacaaccaaatgcgggcacgttttctgcaagagttgc
atcgaaacagccatagctacccagcacagatgtcctatatgtcggcgtaagcttcgaaaa
cgagatattatccgaatttacctaccgttttga
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