Cucurbita pepo subsp. pepo (vegetable marrow): 111800994
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Entry
111800994 CDS
T05351
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111800994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111800994
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111800994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
AIM3_BBC1_C
Motif
Other DBs
NCBI-GeneID:
111800994
NCBI-ProteinID:
XP_023540710
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Position
LG08:763596..771864
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AA seq
775 aa
AA seq
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MSEMANADPEGIDGVRMTWNVWPRTKVEASKCVVPLAASIAPIRPHPEIPTLPYAPLRCK
SCSAVLNPFSRVDFTAKIWICPFCYQRCHFPPHYAMISETHLPGELYPQYTTVQYAIPQS
INPNPAMDSAQQANPSPVFLFLLDTCMIEEELGFVKSALKRAIGLLPDNALVGFVSFGTQ
VQVHELGFSDMSKVYVFRGTKEVSKEQVLEQLGLAIGGRRVAGAYQKGVQNGFPNSGVTR
FLLPASECEYTLNSLLDELQTDQWPVSPGNRASRCTGVALSVAASLLGACLPGTGARIIA
LVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFKKAIKFYESLAKQLVGQGHVLDLF
ASALDQVGVAEMKVTVEKTGGLVVLAESFGHSVFKDSFKRVFEGGEHSLGLCFNGTLEIN
CSKDIKIQGIIGPCTSLEKKGPAIADTVIGEGNTTLWKMCGLDKSTCLTVFFDLSSSDRS
SSPGTANPQLYLQFLTSYQDPEGQSMLRVTTVTRRWIDTAVSSEELVQGFDQEAAAVVVA
RLTSLKMEMEEGFDAIRWLDRSLIRLCSKFGDYRKDDPSSFTLNPSFSLYPQFLFNLRRS
QFVQVFNNSPDETAYFRMLLNRENITNAAVMIQPSLISYSFNSLPAPALLDVASIAADRI
LLLDSYFSVVVFHGMTIAQWRNMGYQNQPEHQAFAQLLQAPHDDAQIIINERFPVPRLVV
CDQHGSQARFLLAKLNPSATYNNAQEMAAGSDIIFTDDVSLQVFFEHLQRLAVQS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatggcgaacgcagatcccgaaggaatcgatggagttcgtatgacatggaat
gtttggcctcgtaccaaagttgaggctagcaagtgcgttgttccactcgctgcttcgatc
gctccgatccgtcctcaccctgagatcccaactctcccttacgcgccgctccgttgtaag
tcttgctccgcggttctcaacccattttcccgtgttgactttaccgccaagatttggatc
tgtccgttttgctaccagagatgtcattttcctcctcattatgccatgatctctgagacc
catcttcctggggagctttatcctcagtacaccactgttcaatatgctattccgcaatca
attaaccccaatcctgctatggattcggcccagcaggcgaatccttccccggtttttctg
tttctgcttgatacctgcatgatcgaggaggaattggggtttgtgaaatccgcgcttaaa
agggcgatcgggttgttgcctgataatgcacttgttggatttgtttcgtttgggactcag
gttcaggttcatgaattgggattctctgatatgtctaaggtgtatgtgtttcggggtacg
aaggaggtttctaaggagcaggttttggagcaattgggtcttgccattggtgggcggaga
gttgctggagcgtatcaaaagggggtccagaatggattccctaattccggtgttacacgt
tttttgctgcctgcttctgaatgcgaatataccctcaattccttgttggatgaacttcaa
acggatcaatggcctgtttctcccggtaatcgggcatctcgatgcaccggagtggcgttg
agtgttgcagctagtttgcttggagcttgtttgcctggcactggtgctcgaattatcgct
ttggttggtggaccatgcacagaagggcctggcacgattgtttccaaagatctatcagac
ccagtacgttcacataaagacctcgacaaagatgcagccccttactttaaaaaagcaatc
aaattctatgaaagtcttgcaaaacaactggttggccaaggccacgtcttggatcttttt
gcatcagcacttgatcaggttggtgttgcggaaatgaaagttacagtagaaaaaactggt
ggccttgttgttctggctgaaagctttggacattcggtatttaaggactctttcaagcgt
gtgtttgaaggaggggagcactctcttggtctttgctttaatggaacccttgagatcaat
tgttcgaaggatatcaaaattcaggggataattggaccttgcacatctttggagaagaaa
ggtcctgctattgccgatactgttattggggagggcaatacaacattgtggaaaatgtgt
ggtcttgacaaaagcacttgtttgacagtgttttttgatctttcatcaagtgatagatca
agttctccaggaactgcaaatccacagttgtatttgcagtttcttactagttatcaagat
cctgaaggtcagtcaatgcttcgggttacaactgtcactagaagatggatagacactgca
gttagctcagaggaattggtgcaagggtttgatcaagaggctgctgcagttgtcgtggcc
agattaacttccttgaaaatggagatggaggagggatttgatgctattcgatggttggat
cgatccttgattcgcctctgttctaagtttggtgattaccggaaagacgatccatcttcc
tttactctaaatccttcattttctttgtatcctcagttcttgtttaatttgcggcgttca
caatttgttcaggtgtttaacaacagtccagatgaaactgcatattttaggatgttgtta
aatagggagaacattacaaatgctgccgtgatgatccaaccgtcactaatatcgtactca
ttcaattcactgcctgcaccagcattattagatgttgcttccattgcagctgatcgtatt
ctcctgctagattcatatttcagtgttgtcgtatttcatgggatgacaatagctcagtgg
cgtaatatgggataccaaaatcagccggaacaccaagcatttgcacagttattacaagct
cctcatgatgatgcccaaattatcattaacgaacgttttccggtacctcgtctggttgtc
tgtgatcagcatggctctcaggctagattcttactggcaaagttgaatccatccgcaaca
tataacaatgctcaagaaatggcggctgggtcagatatcatatttactgacgatgtcagc
cttcaagttttctttgagcatcttcagaggttggctgtccaatcttga
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