KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801132
Entry
111801132         CDS       T05351                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpep03036]
    111801132
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111801132
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111801132
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111801132
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_ELP1_1st B-prop_COPA_B_2nd PROPPIN Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 111801132
NCBI-ProteinID: XP_023540886
LinkDB
Position
LG08:7819919..7824820
AA seq 350 aa
MELWDGRFELKETAKLEGHTDRVWSLAWNPATGAEGIPLVFASCSGDKTVRIWEQSPSSG
SWNCKAVLDETHTRTVRSCAWSPNGKLLATASFDATTAMWENIGGDYECVSTLEGHENEV
KSVSWNASGSLLATCSRDRTVWIWEVLPGNEYECVSVLQGHTQDVKMVQWHPTLDLLFSC
SYDNTIKVWAGDDDNDDWHCVQTIDESNNGHSSTVWALSFNATGDKMVTCSDDLTLKIWE
TDETRLHSGDGYSPWRHTCTLSGNHDRTIFSVHWSRNGIIASGAADDAIRLFVENQEKMV
DGSSFQLLYKKEKAHNMDVNSVQWSPGEKRLLASASDDGTIKIWELVSVS
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggagctttgggatggccgattcgagctcaaggagactgcaaagcttgaaggtcacact
gatcgggtatggagtctggcctggaatcccgccaccggagctgaaggaattccacttgtt
tttgcgtcctgtagcggcgataaaaccgttcgtatctgggagcaaagtccttcctctggt
tcgtggaattgcaaggcagttttggatgaaacgcatactagaactgttaggtcatgcgct
tggtcaccgaacggaaagttattggcaactgcaagcttcgatgccaccacagctatgtgg
gagaatatcgggggtgactatgaatgcgtttctaccctagagggtcatgagaatgaggtc
aaaagtgtatcttggaatgcttctggttctctacttgcaacgtgcagtcgagatagaact
gtttggatttgggaagtattgccaggaaatgagtatgagtgtgtttccgtgttgcaagga
cacacacaggatgtaaaaatggttcagtggcaccctaccctggatcttttattctcatgt
agctatgataacactatcaaggtttgggcaggtgatgatgacaatgatgattggcactgt
gttcagactatagatgaatctaacaatggtcactcttctactgtttgggccctttctttc
aatgcaactggagacaaaatggtcacctgtagtgatgatctcacccttaaaatatgggaa
acagatgagacaaggttgcattctggggatggctattcaccatggaggcatacttgtact
ctttctggaaatcatgatcgaacaatcttctctgttcattggtcaagaaacggcataatt
gctagtggagcagctgacgatgctattcgtttgtttgtggagaatcaagagaaaatggtt
gatggatcttcattccagttgctatataagaaggagaaggcccacaacatggatgtaaat
tcagtgcaatggagcccaggggagaagaggcttcttgcttcagcgagcgacgacggtaca
ataaagatatgggagctggtttctgttagctaa

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