Cucurbita pepo subsp. pepo (vegetable marrow): 111801515
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Entry
111801515 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111801515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111801515
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111801515
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Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111801515
NCBI-ProteinID:
XP_023541307
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Position
LG01:complement(20102039..20124694)
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AA seq
710 aa
AA seq
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MPSLPGFPFSSPMWSELCLRRTTPSLNAHDNINNTTTAADEHPISNAVECYACTQVGVPA
FHSTSCDHAHQQPEWEASAGSSLVPIQPTKTSPRRADPQHRSGRFGSVLDPRTKRVQRWN
RALLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLIAVVTVLRTFLDVVHLWHVWLQF
RLAYVSKESMVIGCGKLVWDARDIASHYVRSFKGFWFDAFVILPVPQIVYWLVLPKLIRE
ERIKLIMTVILLMFLFQFLPKVYHSIILMTRMQKVTGYIFGTIWWGFGLNLIAYFIASHV
AGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLSSSTTIGNSCGRNSTSAFR
KPICLDVNGPFAYGIYKWALPVISSNSIAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVC
FSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRHRVRH
YEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLDELILDNICDRVK
PLVFSKDEKIIREGDPVPRMLFIVCGRVKRNQSLSKGMTATSLLESGGFLGDELLSWCLR
RPFLERLPASSATFVCIEPTEVFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTW
AAVNIQFAWRRYRKRMRRPVITVVENGSNERRLLQYAAMFMSFRPHDHLE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctccctggcttccccttctcctctcccatgtggagcgagctttgcctgagg
cgaaccaccccttcactcaatgcccacgacaacattaacaacaccaccaccgctgccgat
gaacaccccatctccaacgccgttgagtgctacgcctgcacccaagtcggtgttccggcc
ttccattccaccagctgtgaccatgcccaccagcagcccgaatgggaggcctccgccggc
tcttccctcgtccccattcaacccacaaagacctctcctcgccgcgccgacccacaacat
cgttccggtcgcttcggcagtgttctcgaccctagaaccaagcgggtccaaagatggaac
cgggctctgttattagcccgtggaatggccctcgccgtcgatcctctctacttctacgcg
ctctccatcggacgtggtgggtcgccgtgcctgtacatggacggtggattaatcgccgtt
gttactgttctccgcacgttcctcgatgtcgtgcacttgtggcacgtttggctccagttc
cgcctcgcctatgtgtccaaggagagcatggtcattggctgcggcaaactcgtctgggac
gctcgtgatatcgcctcccactatgttcgttccttcaaaggcttctggttcgatgccttc
gtgatcctcccagttcctcagattgtttattggttggttttaccaaaactaatcagagaa
gagagaatcaagcttataatgactgtaatcttgttaatgttcttgttccaattcctccca
aaagtttaccactccattattttaatgacaagaatgcaaaaggtcactggatacatcttt
ggcaccatttggtggggttttggactcaatctcattgcctatttcatcgcctctcatgtt
gctgggggttgctggtatgttcttgcaatacagcgagttgcttcttgcatccagcaacat
tgtgagagaaacaagtgcaacctatctctgtcttgctcagaggaggtgtgttatcagttt
ctctcatcttctacaaccataggaaattcgtgtggtcgtaattcgacttctgcctttagg
aagcccatatgcttggatgttaatggtccattcgcctatggcatctacaagtgggctctt
ccagtcatttctagcaattccattgctgtcaaaattctttatcccatcttttggggctta
atgactcttagcacgtttggcaatgatctcgagcccacgagtaattggctagaagtatgt
tttagtatttgcacagtactcagtggattgctgctttttactcttttgattggtaacatc
caggttcttttgcacgccgtcatggcaaggaggcgaaaaatgcagctgagatgtcgagat
ttagagtggtggatgaggagacgacaattgccatctcgtttgagacatcgtgttcgacac
tatgaacaccagagatgggcagccatgggtggagaagatgagatggaactgatcaatgat
ttgcctgaaggtcttagaagagacattaaacgccatctttgtgttgatcttatcagaaag
gtgccgctgttccaaaacctggatgagctgattctcgacaacatctgcgaccgagtcaag
ccacttgtattttccaaagatgaaaagattatcagagaaggagatcctgttccaagaatg
ctattcatagtgtgtggacgtgtaaaacgtaaccaaagcctgagcaagggcatgacagca
acaagtttgctagaatcgggaggatttctgggcgacgagctgctatcgtggtgtcttcgg
cgcccatttctcgagaggcttccagcttcatcagctacatttgtatgcattgaaccaaca
gaagtatttgccctgaaagcagaccatctgaagtacataaccgatcacttccgctacaaa
tttgccaacgaacgactgaagagaactgcaagatattactcctccaactggagaacatgg
gctgctgtgaacatacaatttgcttggcgtcgctacagaaagaggatgagacgtccagtg
ataactgtggtggaaaatggaagcaatgaacgtaggcttctgcagtatgctgcaatgttc
atgtcattcaggccacatgaccatcttgaatag
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