KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801579
Entry
111801579         CDS       T05351                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111801579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111801579
   03041 Spliceosome [BR:cpep03041]
    111801579
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111801579
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111801579
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111801579
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111801579
NCBI-ProteinID: XP_023541373
LinkDB
Position
LG09:complement(9890537..9892607)
AA seq 202 aa
MAFLSKVGKIFSQSSASRIGSISQPSQLSIFQAIRFMSSSKVFVGGLSYGTDDHSLREAF
TKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASSAIQALDGQDLHGRRIRVNFATERS
RGSFVGGGGGYSGGGGYGSADYNRSSASQGGDNYFSADSGSDFTSNHQSGGGLDSGDNTR
DDFLGGGKSGDEDNNDDYAKRA
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgtttcttagtaaagttgggaaaatatttagtcagagttctgcatcaaggattggt
tcaatttcgcaaccttcccagctgtctatctttcaagctattagattcatgtcaagttca
aaagtttttgtaggaggcctttcttatggtactgatgatcatagtctgagggaagccttc
actaagtatggggaagtagttgaagcgagagtcatattggatcgtgatactggtagatcc
agaggttttggttttgtcactttcgttggcaacgaagaagcctccagtgctattcaagca
ctggatggacaggatctccatggccgtcgcattagggtaaactttgcaactgaaaggtct
cgtggtagctttgttggtggtggtggtggatacagcggcggtggtggttatggaagtgca
gattataatcgcagtagtgcatcccagggaggggacaactatttttctgccgattctggt
tcagacttcaccagtaaccatcagagtggcggtggactggattctggagataatactcgg
gatgattttttgggcggagggaagtctggggatgaggataacaacgacgactatgccaaa
agggcttga

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