Cucurbita pepo subsp. pepo (vegetable marrow): 111801603
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Entry
111801603 CDS
T05351
Name
(RefSeq) flap endonuclease GEN-like 2
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111801603
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111801603
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
Chromo_shadow
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
111801603
NCBI-ProteinID:
XP_023541410
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Position
LG09:complement(539627..544513)
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AA seq
560 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR
LRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL
MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL
GDGGHVVCYEMDDIERQLGFGRNSMIALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV
LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR
VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ
EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE
LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCKFRQGNCEKIDVIDLSDTENDQS
PEHERKARELRLFLASLKGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaaagaacttgtgggatatcttagaatcgtgcaagaaaactctcccacttcat
cgtcttcagaataagcggctatgcatcgatctctcgtgttggatggttcagcttcaaaat
gtaagcaaatcgcattcttgtctgaaccagaagatttacctgaaagggctctttcaccgc
cttcgagcgctcattgccttgaattgcagccttattttcgttacagatggttcaattcct
ggcatcaaactttcaacttatagacgccgtttgaacaatggaagtgaggttgttaaaaat
gacacaaattcccagcaaatatcctcactgaaaagaaacaagggttctgagttctcttta
atgatcaaagaggcaaaagccttaggactgacgcttggtatcccttgtctagatgggctc
gaggaaggggaagcacaatgtgcattactaaattcagagctattatgtgatggatgtttt
acttcagattcagatgttttcctttttggtgctaggacggtatatagggacataggcctt
ggagatggtggtcatgtagtgtgttatgaaatggatgacattgaaagacaattgggcttt
ggaaggaactcgatgattgctttggccctacttcttggcagtgactactcgcaaggcgtt
tatggcatgggtcgtgaatctgcttgtcagattgttaaagcagtaggagatagcactgtc
cttcaaaaaattgcatctgaaggactgtctttcacaaagaaggggaaaaattccaagaag
ccaggacttcgtaattctggggatgggcagtacatgcataaatgtgaggagttttcacaa
gtcattgatgcctatttgagacccaaatgccattcggctgattctgatgctgtgactagg
gttcttattcagcattcttttcaacgtgccaagcttcagcagttctgtgccgaatttttt
gcttggcctcctgagaaaacagatgagtacattcttccaaagatagcagaaaaagatcta
cgacgatttgctaatcttcgttcgaacacatcaaacctcggtttcaacattccacttcaa
gaagtacctgtaagttgtcctgtttctggaatcgtcaagcaccgaaaagtccaggggaac
gaatgctatgaggtttcatggaaaaatttagatgggcttagttcatctgttgtaccagca
gatctcttgcagagtgcctgtccggagatgattgtagaatttgaagagcaaagagctcaa
ggaagaaaaccaaataagtgcagaacaaaaacaaagaagtcagaggctactgtggctgaa
attgatgaaagattccaaactctgttgcttgaaattgaatctgaaagcagggcagttcgt
aatctttcccaagctccaatagtttcggaaaacagtaactctgctactggtttggatgag
ttgcaagatattattcttgacgtcgaaccaaccattgttgatcatgctcacggtacagag
aacgttgaggtcatcgatctcttaagcccttcacctgcaattcaaacctgcaaatttcga
cagggaaactgtgaaaagattgatgtaattgatttgagtgacacagaaaatgatcagtca
cctgaacatgagagaaaagcaagagagttgagattgttcttagcctccttaaagggtaaa
tga
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