KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111801615
Entry
111801615         CDS       T05351                                 
Name
(RefSeq) coilin-like
  KO
K13150  coilin
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111801615
Spliceosome [BR:cpep03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111801615
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 111801615
NCBI-ProteinID: XP_023541431
LinkDB
Position
LG09:3636835..3671324
AA seq 600 aa
MEVVRLRVLFKHKDLLTASLSGLSRSWIVLKPHFRTISDLSSYILSVFRLHDACPNGLIL
SMDGFVLPPFESVGILKDKDIVRVKKKKSKAICLSVGNKLIKTEEFRESESEEDELRAPL
PVKAAPVEKKVSKKRKASKIIRNTKRKKNNSFPSEEFPTIVADVHYANEMHKERNHLKSD
LPQKVIGSENDSPSSSSASESDTSSNIDIDGRNNNIIKSTGNAKRIDQIGVGGKHIELSN
KAGETQKGPSRSTRRKKAKRHWLRERAQNEQQQLLLETSVDQGPSQNDDADMDDDTVPVV
VKPGHIRFEPVGKVAADQTEKQPNHLPLETLHWNGITNKKKGQKWGKEKTSSLNRNNSNN
HTDEPLRLPTTEAEQHTISAPVVGLINFDELEPCSGLPQKGDVVAYRLIELSSTWTPEIS
SFRAGKVSWYDTESNRIMLNPVPEYPLPVKKEMDEDSALHLDSTPYGENGSLKIDFASLV
DLRLIRQGSLDSSKTMVNQENTSAKQSAESSIFAHSIGNANDTKQGNGKVTAWDEISEAL
SAKKAELTKNDGWNREESSGRRPDGRNQEESSGKRSRSCRALRGSALGPIVALLRARNEI
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggaggttgtgagactgcgagttttgttcaaacacaaggacctattgacggcgtcgctc
tcgggattgagccggagctggattgtccttaaacctcatttccgaacaatttccgacctc
tcctcctacatcctttccgtttttcgtcttcacgatgcttgccccaacggtctcattctt
tctatggatggctttgtgttacctccgtttgagtcggttggtatcttaaaggataaagac
attgtcagagtgaagaagaaaaaaagtaaggcaatctgtctcagtgttggtaacaaattg
atcaaaactgaggaattcagggagagtgaatcagaggaagatgaacttagagctcctttg
ccggtgaaagctgccccagttgaaaaaaaagtgtctaagaaaagaaaagcttcgaagata
attcgcaacacgaagaggaagaaaaataattctttccccagtgaagaatttccaactatc
gtagcagatgttcattacgctaatgaaatgcataaagaaagaaatcatctgaagtctgac
ctcccacaaaaggtcataggcagcgaaaatgattcacccagcagttctagtgcatctgaa
tcggatacatccagcaacattgatattgatggaagaaacaacaatattattaagtcaact
gggaatgcaaagaggattgatcagattggagttggcgggaaacatattgagttgtccaac
aaagctggtgaaactcaaaagggtcctagtagaagtactcgtcgtaaaaaggcaaaaaga
cattggttgagggaaagagctcaaaatgagcaacagcagctgttattggaaacaagtgtt
gatcaaggacctagtcagaatgatgatgctgatatggatgatgacactgttcctgtggta
gttaagcccggacacattcgctttgagccagttggaaaagtggctgcggatcagactgaa
aaacaaccaaaccacttgcctttggagacattacactggaatggcataaccaacaagaag
aagggtcagaaatggggcaaagagaaaacttcatctttgaataggaacaattctaacaat
catacagacgaacctcttcggttgcctactactgaagctgagcaacatacaatttcagca
cctgtagtcggtctcataaattttgatgaacttgaaccgtgcagtggcttgcctcagaaa
ggtgatgtagttgcatatcgtttgattgagttatcatcaacctggacacctgagatttcc
tccttccgagctggtaaagtatcatggtacgacactgaatccaatcgaattatgctaaat
ccagttccagaatacccattacctgttaaaaaggagatggacgaggattctgcattacac
ttagattcaaccccatatggtgaaaatggctctttaaagatagattttgcctctcttgtt
gatcttcggcttatcaggcaaggaagcttggattcttcaaaaactatggttaaccaggaa
aacacttctgctaaacaaagtgcagaaagttccatattcgcccatagcatcggaaatgcc
aacgacactaaacaaggtaatggaaaagtaactgcgtgggatgaaatcagcgaggctctg
agtgcaaagaaagctgaacttactaagaatgatggttggaatcgagaagaaagttcagga
aggaggccagatggtaggaatcaagaagaaagttcaggaaaaaggtcaaggtcctgtagg
gcactcagaggcagcgcccttggtccaatagtggctctattaagagctcgtaatgaaatc
taa

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