Cucurbita pepo subsp. pepo (vegetable marrow): 111801622
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Entry
111801622 CDS
T05351
Name
(RefSeq) intron-binding protein aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111801622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111801622
Spliceosome [BR:
cpep03041
]
Complex B
Other components
Prp19-related factors
111801622
Complex C
111801622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
UvrD_C_2
AAA_22
ResIII
AAA
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-GeneID:
111801622
NCBI-ProteinID:
XP_023541442
LinkDB
All DBs
Position
LG09:2753613..2765037
Genome browser
AA seq
1567 aa
AA seq
DB search
MPKVYGTGVYDFKRHRVAEYPVESNQVDDKLVESKPGATLPNTITLSEIQRDRLTKIAAE
NWSKVRDPSKPKEPFDPELVKKIYETELSIKEGRKTVPLQRVMILEVSQYLENYLWPNFD
PETATFEHVMSMILMVNEKFRENVAAWVCFYDRKDVFKGFLERVLRLKEGREISIAEKTN
YLVFMINAFQSLEDEIVSETVLRIAGLQSWHSLSYGRLQMELCLNTDIIKKWKRMIKREA
KEFIKRGEVYDPLSTLEAKFLRNLIEEFLEVLDSEVFPQSNSGDENDHFVDANGLLEGDN
ACILYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYKHEKGKLFAQLVDLL
QFYEVFEINDHVGTQLTDDEVLQSHYDRVQSFQLLAFKKIPKLRELALANVGSIHKRADL
AKKLSVLSLPELKDLVCSKLKLVSTEDPWSDRADFLIEVVVSFFEKQQSQKEAINALPLY
PNEEIMWDESVVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQE
AVPHLLAYINNEGQTAFRGWSRMAVPIKEFKITEVKQPNIGEVKPASVTADVTFSISSYR
AQIRSEWNALKEHDVLFLLSISPSFEPLSSEEAAKASVPQRLGLQCVRGCEIIEVRDEEG
TLMNDFTGRIKPDEWKPPKGELRTVTIALDTAQYHMDVSAIAEKGTEDVYGTFNVLMRRK
PKENNFKAILESIRDLMNEYCIVPDWLHNILLGYGNPSAAQWTNMPDLLETVDFKDTFLD
ADHLKECFPDYQVCFTNPDGEEILHPSPPFRIKFPRALKGSNHALPENKKSSSVPKNDEN
MVDACGEKEKLIVEVYTPPDPGPYPQDQPKQNSVRFTPTQVGAIISGVQPGLTMVVGPPG
TGKTDTAVQVLNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQEL
ATDLDFSRQGRVNSMLVRRLELLSEVEKLARSLQLPEDVGYTCETAGYFWLLHVYSRWEQ
FIAACAGNEDKPNFIEERFPFKEFFSNAPNPVFTGESFDKDMRAAKGCFRHLKTMFQELE
ECRAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLRLGFKYDNLLMEESAQILE
IETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIP
YIELNAQGRARPSIAKLYNWRYRELGDLPYVKEAAMFHRANAGFSYDYQLVDVPDYQGRG
ETAPSPWFYQNEGEAEYVVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYN
FIGAPSKVTTVDKFQGQQNDYILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSL
FEQCYELQPTFQLLLQRPDRLGLNLNEITSYTERHVADTGPIYHVSGTEEMASILEQLYQ
IRIGSQQFDGYAAHPGQLAPNNDIPHNSLLGENAMDTEQANDDGVSDTAMETSKTDGLEN
GANGGSALENGANGKEDNKVANKDGGSKEEPLLEDSSTKNEDNEANNDDGNVVPRESNPD
GTTTMEE
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtatatggaactggtgtttatgatttcaagcgtcacagagtggcggagtac
cctgttgagtccaaccaggtcgacgataagcttgtggagtcgaagcctggtgcgacactg
cctaacacgataacgctatcggagattcagcgagaccggttgacgaagattgcggcggag
aactggtcgaaagtgagggatccttcgaagccgaaggagccttttgatccagaattggta
aagaagatttatgagacggagctttcgattaaggaggggcggaagaccgtgcctctacag
agggtgatgattttggaggtcagtcagtacttggagaactatttgtggcctaattttgat
ccggagaccgcgacgtttgagcatgtaatgtcgatgatactcatggtcaatgaaaagttt
cgagagaacgtagcagcttgggtctgtttttatgatcggaaggatgtcttcaaggggttt
cttgagagggttcttcgactgaaggagggaagagaaataagcattgcagagaagacaaat
tatcttgttttcatgattaatgcctttcagagcttggaggatgagattgtcagtgagact
gtattgagaatagcaggcctgcagtcttggcacagtttatcttatggtcgtttacagatg
gagctttgtcttaatactgatataataaagaaatggaaaaggatgataaagagagaggct
aaagagtttattaaacgaggggaggtttatgatccattgtcaactcttgaagcaaagttc
ttaagaaacctcattgaagagttcctggaggttttggatagtgaagtcttccctcagagt
aattcaggtgatgaaaatgatcattttgttgatgccaatggcttgctagagggagacaat
gcttgcattttgtattgtgagaggttcatggagtttctgattgatcttttaagtcagctt
cctacaaggagataccttcgacctcttgttgctgatgtcgctgtcgttgccaaatgtcat
ttaagtgctctttacaaacatgaaaaaggtaaactttttgctcagctggttgatctgctg
cagttctatgaagtatttgagatcaatgatcatgttggaacacaactgacggacgatgag
gttctccaatctcattatgaccgtgtccaatcttttcagcttcttgcatttaagaagatt
ccaaagctgcgggaacttgcattggccaatgttggttcaattcataaacgtgctgacctt
gccaagaaactatctgtgctctctcttccagagctgaaagatttggtttgctctaagctc
aagttagtgtcaacagaagatccttggtcagatagagctgattttttaattgaggttgtt
gtttccttttttgagaagcaacagtctcaaaaggaagccatcaatgcacttccactttac
ccaaatgaggagataatgtgggatgagagtgttgtgccaagcattaattactcgggggaa
ggttgcttggctcttcctaagttaaatttacagtttttaacactccatgattatcttctg
agaaattttaatctctttcgcctggaatcaacttatgagatccgtgaagacattcaggaa
gctgtgccccatctccttgcctacattaataatgagggacaaactgctttccgtggttgg
tcaagaatggccgttcctattaaagaattcaagattactgaggtaaagcagccaaatatt
ggggaagtaaagcctgcatctgtgactgcagatgtcacttttagcatttctagttataga
gcccaaataagatcagaatggaatgctcttaaagaacacgatgttttatttttactctct
attagtccttcatttgagccgctaagttcagaggaagctgccaaggctagtgttcctcaa
cgtcttggccttcagtgtgtacgtggatgtgaaattattgaggttcgtgatgaagaggga
actcttatgaatgactttactggaagaattaaaccggatgagtggaagcctcctaaaggg
gagttgagaactgtaactattgctttagatacagcacagtaccatatggatgtcagtgct
attgcagagaagggtacagaagatgtttatgggacatttaatgttttgatgaggaggaaa
cccaaagaaaataatttcaaagcaatcctggaatctatcagggatcttatgaatgaatac
tgtatcgttcctgattggttgcataatatacttcttggttatgggaatccttctgctgct
caatggactaacatgccggatcttttagaaacagtagactttaaagatacatttcttgat
gccgatcatttgaaagaatgttttccagattatcaggtctgttttactaatccagatggt
gaggagattttgcaccctagtcctcctttccgtattaagtttcctagagcccttaaaggt
agcaatcatgcccttccggagaacaagaagtcttcaagtgttccaaagaatgatgaaaac
atggtcgatgcctgtggtgagaaggaaaagcttatagttgaggtgtatactcctcctgac
cctggtccttatcctcaagatcagcctaaacagaactctgtcagatttacaccaacacag
gttggagcaatcatttctggtgttcaacctggattaaccatggttgttggaccaccaggt
actggaaagactgacacagctgttcaagttctaaatgttctttatcacaattgcccttca
cagagaacattgataatcacccactcaaatcaagctctgaatgacctattcgaaaagata
atggagagagatgttcctgcccgctatctgcttcgtcttggtcaaggtgaacaagaatta
gcaaccgatcttgatttcagccggcaagggcgtgttaattcgatgcttgtgcgaaggttg
gaattgctaagtgaagttgaaaagctggcaaggtctctccaactccctgaagatgttggt
tatacttgtgaaactgctggatacttttggttactgcatgtgtactcacgctgggagcaa
ttcatagctgcctgtgctggaaatgaggataaaccaaattttattgaagaaagatttccc
ttcaaggagttcttctcaaatgcaccaaatccagttttcacaggtgaatcttttgataaa
gatatgcgggcagctaagggatgctttcgtcatcttaagacaatgtttcaggagcttgaa
gagtgtagggcttttgaattactcaagtccacagctgatcgtgcaaactatttgatgact
aagcaagcaaagattgttgcaatgacttgtactcatgctgccctaaagaggaaggacttt
cttcgattaggtttcaagtatgataatttgctgatggaagaaagtgcacaaatattagag
attgaaacttttataccaatgttacttcagaggcaggaagatggttatgcacgtctcaaa
cgctgcattttaattggtgatcaccatcagttacccccagttgtgaagaacatggctttt
caaaagtatagccatatggatcaaagtttatttacaaggtttgtcagattgggtattcct
tatattgaactcaatgctcaaggtcgagctagaccaagtatagccaagctttacaactgg
agatatagagaattgggagatcttccctatgtgaaggaggcagccatgtttcatagagcc
aatgctggattctcttacgattatcagctagtggatgtgccggattaccaagggaggggt
gagactgctccttctccttggttctatcagaacgagggggaggctgaatatgttgttagt
gtgtatatttatatgcgtttactagggtaccctgcaaataagatatccatcttgacaact
tacaatggccagaagcttctaatccgagatgttattaatcgtagatgtgtaccatacaac
ttcattggtgcccctagcaaggtgacgacagtcgataaatttcaaggtcagcagaatgat
tatatattactgtctctcgttcgaacccgctttgtggggcacctccgtgatgttagaaga
ttgattgtggccatgtctcgtgctcgacttggtttgtacgtattctgccgccgatctctg
tttgaacaatgctatgaactgcagccaacatttcaacttctgcttcagaggcccgaccgc
cttggtctcaatttgaatgagataacatcatatacagaacgtcatgttgcagatactggt
cctatttaccatgttagtggtactgaggagatggccagcattctggaacaactttatcag
attcgtatcggcagccaacaatttgatgggtatgctgctcatccggggcagcttgctccg
aacaatgacataccgcataatagtcttcttggggaaaatgctatggatacagagcaagcc
aatgatgatggcgtttcagacaccgctatggaaacttcgaagaccgatggtcttgagaac
ggcgcaaatggaggatctgcacttgaaaacggtgctaatggaaaggaggataacaaagtg
gctaataaagatggtggatcgaaggaggagcctctgctcgaggatagttcgactaagaat
gaggacaatgaggctaataacgatgatggaaatgttgtgccaagggaaagtaatcctgat
ggaacaacaacaatggaagaataa
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integrated database retrieval system
