Cucurbita pepo subsp. pepo (vegetable marrow): 111801715
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Entry
111801715 CDS
T05351
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111801715
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111801715
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111801715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-RING_16
RINGv
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111801715
NCBI-ProteinID:
XP_023541596
LinkDB
All DBs
Position
LG09:complement(3603781..3614367)
Genome browser
AA seq
138 aa
AA seq
DB search
MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVLQMMSANPSSSVDEYEQESGRGR
RISITHFKSLRQSFNGGTETENCSVSRCSVAECSVCLCGFEADEEVSELSCKHFFHKSCL
SKWFDNQHVTCPLCRSIQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaaatttccccccttcagccgaaggagtgttgctgttaccagttctagtg
atgaacacagtcatgtcgatggctttcttgaagaacttggtgagatctgtgctacaaatg
atgagcgccaacccctcgagttctgtggatgaatatgaacaggagagtggaagaggaaga
agaatctccattacccatttcaaatccttacgccaaagcttcaatggcggaacagagact
gaaaattgctctgtttcgaggtgttctgtggcagagtgctctgtttgtctttgtggattt
gaagctgatgaggaagttagtgagttgtcttgtaagcatttttttcataaatcttgtctt
tctaaatggtttgataatcagcatgttacttgccctctctgtcgctccattcaatag
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