Cucurbita pepo subsp. pepo (vegetable marrow): 111801732
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Entry
111801732 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111801732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111801732
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111801732
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111801732
NCBI-ProteinID:
XP_023541623
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Position
LG09:complement(220602..225296)
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AA seq
671 aa
AA seq
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MYLSVYLLHLLCPLSRATDGFHQKEHPSAGETHPRYSLRSIRSVSASFSSSFDRLTSFGN
IYFEQEIRSKGLGYIKSIFDKNPLLLHLWNEILVMLCVIATSLDPLFCYILVVDDDKRCV
GFDKKLRKVAVILRSITDLLYIILIVCHFHLGYSSFYNANRDDADDGVCTRAWRFLLSYF
TVDVLAVLPLPQVVSLILIPSLKGYGFIYAVRSLKYILVVQYLPRVFRIYSFLKKVRWSS
NILPETAGAKAAFNLFLYMLASHVIGAFWYLFTIERKTVCWEERCVHCPLNCDYATNGNS
SADSFCSGKSGNESQTFDFGMFEVGLRIVKSRNFMRKISFCYWWGLQKLSSLGQDLKTSD
HLWEIYFAVTITISGLILFALLVGNLQTYLQSTIARLEEMRLKGQDIELWMAFHSLPRKL
KKRIKKYERYKWRETKGVDVELLLHNLPRDLRRDTKRHLCSTPLKSVPKFQNMDDKLLDA
ICDCLRPVLYIERSLIIQEGEPLDEMVFIIRGQVRIYSKSDNGIAASSTLFNCLTKGDFY
GEALLEWALHHPTSTTVPISTKTLRAHSKVEAFILIANDLKTVVSKFWWLFSRNSPSLKA
IWEPWAALALQVAWRRYHKSKKEKNRSRLGIEGRINTQKSDAPFTASTYIVRALRALKLK
RKKSQAESSRV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtcggtttatttgttgcacttgctctgccccctgtccagggctacagacggt
tttcatcaaaaggaacatccatcagctggagaaacacacccacggtactccctaagatca
ataagatcggtttcagcaagcttttcctctagttttgacaggcttacgagttttggaaac
atatatttcgaacaagaaattaggagtaaagggttgggatatatcaaaagtatttttgat
aaaaacccactactccttcatttgtggaatgaaatacttgtcatgttgtgtgtgattgct
acctctttggatcctttgttctgttacatcctggtggttgacgatgacaaaagatgtgtc
ggatttgacaagaagttgaggaaagtagctgtaattcttcgctcaattacagacttactc
tacataattcttattgtctgtcattttcatcttggatactcctcattttataatgcaaat
cgtgacgatgctgatgatggtgtttgcacaagagcatggagatttcttttatcctacttc
actgttgatgttcttgcagttcttccactcccccaggtggtgagtttaatactcattcca
agcctcaaaggatacggatttatatatgcagtgaggtcactgaaatatattctcgtcgtt
caatatttgccgagggtctttcgaatctactcgttcttaaagaaagttagatggagttct
aacattctcccagaaactgctggggctaaagctgcattcaatctcttcctttatatgctt
gcaagccatgttattggagcattttggtacttattcactatagagagaaaaacagtttgc
tgggaagaaaggtgtgtacattgccctctaaactgtgactacgctacaaacggcaattcg
agtgctgacagtttttgctctggaaaatctggaaatgagtctcaaacttttgattttgga
atgttcgaagttggtcttcgtattgtgaaatcaagaaatttcatgaggaaaatttctttt
tgttattggtggggtctgcagaaattgagctcattgggacaagacctcaaaactagtgac
catttgtgggaaatctactttgcagtcaccattaccatttctgggttgatactatttgcg
cttcttgttggaaatttgcagacatatctacagtcaaccattgcaagattggaggaaatg
agattgaaggggcaagatattgagctatggatggctttccattccctccctagaaagttg
aagaaaagaattaaaaagtacgaacggtacaaatggcgagaaaccaaaggtgttgatgtc
gagctacttcttcataatcttcctagagacctaagaagggacacaaagcgacatctttgc
tcgactccactcaaaagtgtcccaaagtttcaaaacatggacgataagctactcgatgct
atatgtgattgtttgagaccagtgctgtacattgagcgtagcctcattattcaagaagga
gagccattggatgaaatggtcttcataattcgaggccaagtaaggatatattccaaaagc
gataatggcattgcagctagttccacacttttcaattgccttaccaaaggtgacttttat
ggagaggctcttctagaatgggcgctacaccatcctacttcaacaaccgtccccatatct
accaaaacgcttcgagcacactcgaaagtcgaagcctttatcctcattgcaaacgattta
aagacagtggtctcaaaattttggtggcttttcagcagaaactctccaagtttgaaagca
atatgggaaccgtgggcggctttagctttgcaggtagcatggcggcgttaccataaaagc
aaaaaggagaagaataggtctcggttaggcattgaaggaaggattaatactcagaaatcg
gatgccccatttactgcctctacatatattgttcgtgctcttcgggctttaaagctaaag
cgcaaaaaatcacaagcagaatctagcagagtttga
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