Cucurbita pepo subsp. pepo (vegetable marrow): 111801744
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Entry
111801744 CDS
T05351
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111801744
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
111801744
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
111801744
NCBI-ProteinID:
XP_023541647
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All DBs
Position
LG09:1649484..1663570
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AA seq
877 aa
AA seq
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MAEKQLIVVVEGTAAMGPFWQTVVTDYIEKIVRCFGGNELTGQKPPTSNVEFSLVTFHTH
GSYCGCLVQRTGWTRDVDTFIQWLSAIPFSGGGFSDAAIAEGLGEALMMFPTQQNGGQNQ
QTMDVQKHCILVAASNPYPLPTPVYRPAVPNLEQQDNVEPQSGSSQSYAETVAKSFAQCF
ISLSVICPKQLPKLKAIYNAGKRNLRAADPPIDYVKIPSYLVLISENFVEARAALSRPGI
TSLSANQSPVKMDISPVVPVTGPPPTTTPSANGPIINRQPVSVANVPPATVKVEPNTVTS
MTNGSAYPPHMPSVVRAASQGVPSLQTSSPLSSQEMITNNENTQDLKPLVNGVSQPLRPV
GPANVSILNNISQARVATLNGGTSIGLASMGQTPMAMHVSNMISSGMGSSVPAAQNVFSS
GQSGLTSINGSSTLTQVAPNSGLSSLSSANNNIPGSTNIPTSQAVGNLQGGVNVSQSVPG
MSQGNLAGTQVVQSGISMNQNVISNLSQPGVSSGNGTMIPTPGMPQQVQNGMHSLGVSNN
AAANMPLSQHTAGALQQAQSKYVKFWEGNLSGQRQGQPVFITRMEGYRSASASDKLAANW
PQIMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLS
VSDKACRLIGMLFPGDMVVFKPQISSQQQQQQQQIQQQQQQQMQQQQQQQMQQQQMQQQL
QQQHQLSQLQQHQQLPQMQQQQQQIPQMQQQQQQQQQMQQQQQQQMQQQQQQLPQMQQQQ
QLPQIQQQQQQQQQQQLPQIQQQQQQQQQPQQPQMSQLQTQQQIPQMQQQQQQQQQQMVG
GGISQSYVQGPGRSQLVSQGQVASQGQSNMPGGSFMG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcagctgatagtggtggttgaaggtactgcagccatgggtcccttctgg
caaaccgtcgtaacggattacattgagaagattgttagatgttttggtggaaatgaatta
actgggcagaaaccaccaacctctaacgttgagttctctctggtcacatttcatactcat
ggatcgtattgtggttgtctagtacagcggactgggtggacaagagatgttgatactttt
atacaatggctttcagctattcccttttccggtggtggtttcagtgatgctgcaatagct
gaagggctaggtgaagcacttatgatgttcccaactcagcaaaatggtggtcaaaatcaa
caaactatggatgtgcagaagcactgtattcttgttgctgcaagcaatccttatcccctg
ccaacgcctgtatatagaccagcggtgccaaatttggagcaacaggacaatgttgaacca
cagtccgggagttctcaatcatatgccgagacagttgctaaatcatttgctcagtgcttc
atatctctgtcagttatttgtcccaaacagcttccaaagctaaaagcaatttacaatgct
ggaaagcgcaacctgcgggcagcagatccacctattgattatgttaaaatcccctcgtat
cttgttttgatctctgaaaattttgtggaagcccgtgcagctttaagtcgtcctggaatt
actagtttgtctgcaaaccagagtcctgtgaaaatggacatatctcctgttgtgcctgtt
acaggaccacctccaaccactactccatcagcaaatggacctatcattaaccggcagcca
gtttctgttgctaatgtgcctcctgctactgtgaaagttgaaccaaatactgttacatct
atgacaaatggatctgcatatccaccgcatatgccatctgttgttcgtgcagcttcacag
ggagtcccgagcttgcagacttcttcaccactttcttctcaagagatgatcacaaataat
gagaacacacaagatcttaaacctctagtgaacggtgtttcacagcctttgcgacctgtg
ggtcctgctaatgttagcatcctgaataatatttctcaggcacgagtggctactttaaat
ggagggacttccataggacttgcgtctatgggtcaaaccccaatggctatgcatgtgtct
aatatgatatccagtggaatggggtcgtctgtgccagctgcacaaaatgtattttcatct
ggtcaatcgggtctgacatcaataaatgggtcttcaactcttacacaggttgcgccaaac
tccggtctaagctcacttagttcagcaaataacaatattcctggaagtacgaacattccc
acttcacaagcagtaggaaatctccaaggtggtgtcaatgtgagtcaatcagtaccaggg
atgagtcaaggaaatcttgcaggaacacaagtggtacaaagtggaattagcatgaaccag
aatgttattagcaatctaagccaaccaggtgtttcttctgggaatggtacgatgattccc
actccaggaatgcctcaacaagttcaaaatgggatgcattcacttggagtgagcaacaat
gcagcagctaacatgccattatcgcagcatacagcaggtgctttgcaacaagcacaatcc
aaatacgtgaaattttgggagggaaatctgtctggtcagagacaaggccagcctgttttt
attacaagaatggaaggttacaggagtgcttcagcttctgataagcttgcagcaaactgg
ccgcagataatgcaaatagttcggcttatctcacaagatcacatgaataacaagcaatat
gttggaaaagctgattttcttgttttccgagctatgaatcaacatgggtttcttggccag
cttcaagaaaagaaactttgtgcagtcatccagctaccatcccagactttactgctatct
gtttctgataaagcttgccgcttgatagggatgctttttcctggggatatggttgtgttt
aagccacaaatatccagtcaacagcaacaacaacaacagcaaatccaacagcaacaacag
cagcaaatgcaacagcaacaacagcagcaaatgcaacagcaacagatgcaacaacagtta
cagcaacaacatcagctttctcagttgcaacaacatcaacaacttcctcagatgcagcaa
cagcagcagcagattcctcagatgcaacaacagcagcagcagcagcagcagatgcaacaa
caacagcagcagcagatgcaacaacagcagcagcagcttcctcagatgcaacaacagcag
caacttcctcaaatacagcagcagcagcagcagcagcagcagcagcaacttcctcaaata
cagcagcagcagcagcaacagcagcagccccaacaaccacaaatgtcacagcttcaaacc
cagcagcagattccccaaatgcaacaacagcagcagcaacagcagcaacaaatggtcggg
ggtggaatcagtcaatcgtatgtccaaggtcctgggcgatctcagttagtttcacagggt
caggtcgcttcccagggtcaatccaacatgcctggtggaagcttcatgggttga
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