Cucurbita pepo subsp. pepo (vegetable marrow): 111801749
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Entry
111801749 CDS
T05351
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77
KO
K08518
syntaxin-binding protein 5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111801749
Membrane trafficking [BR:
cpep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111801749
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111801749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
PEP5_VPS11_N
WDR55
Synaptobrevin
RAB3GAP2_N
TFIIIC_delta
NBCH_WD40
Beta-prop_VPS8
Beta-prop_WDR19_1st
Dor1
YfbR-like
Motif
Other DBs
NCBI-GeneID:
111801749
NCBI-ProteinID:
XP_023541659
LinkDB
All DBs
Position
LG01:6087008..6099523
Genome browser
AA seq
1086 aa
AA seq
DB search
MFSKFFHKPVDQQSSSTSAHSPRAQKGVLGAADLVPRVTLHYGIPPTASILAYDPIQSLL
AVGTLDGRIKVLGGDSIEAIFTSTKPLPFKNLEFLHNQGFLVSISNDNEIQVWELERRQL
VSTLRWESNITAFSVLYGTCYMYVGSEYAMVAVLKFDAEERKIKLLPYYLTSNVISEVTG
VELPDQTSVVGVLLQPCSLGNRVLIAYENGLLVLWDASEDRAVLVRGHKDLELTESNITN
HSTDVSDLELEKEISSLCWVTSDGSILAVGYVDGDILFWNFSNVTSSKDQQVNQSRNNAV
KLQLSSGDRRLPVILLRWSPSELQNHKGELFVYGGDEIGSPEVLTILSLDWSPGMKSLKC
MERVDLTLDGSFADIVLSPNVGETKRGTFLFVLANPGQLHAYDNAYLSSIMSQLKKISSG
SGLQYPMVIPNIEPRVMVAKLGFIHREKTVFRALNEVPRDTMWPLTGGIPCQLHDAEDYQ
VERVYIAGYQDGSIRIWDATYPSFSLIFSFEPEVIGLNIAGLSASISALDFCSVTLSVAA
GNECGLVRLYKLIGSSEGASLHYVTETKNEVHNTHGGEGIQCAAVFSVVNSSVSTLSFEN
CGAVLAVGFECGQVAVFDTNTLSLLYLTNDVSNSRSPVISLAIKSFPDTNHLEARSDESI
PPKKGILLAMTKNSYLAVLDSTNGEIISFQSTYAKESSSISMNIIESDYLSPEALSVAHA
PSTPKITGESYSVPANAHSGRTLHEVGADTSSGIANLFVLLCCETALYLHPLKLMNEGEN
KFLQKVNLSKPCCWTTMLKKDGKVSGLVVLYQNGVVEIRSFQNLEQVVWESSLTSILRWS
FKTNMEKTICSSDDGQIMLLNGTEFAVVSLLIYENAFRIPESFPSLHDEVLAAATEASNN
FYPSQNKQDATVSGFLDSVVKGFKGGKVENNVDPLSLCKLNDSHLESLFSYPPFLKPSKG
VTDELGVIELDIDDIEIDEPLVVRFSPKKNKNEKEGKRSEKEKLFEGGSTDSQPKMRTAE
EIKAKYRKAESASTAAEEARNKLLERQQKLDKLRERTEELQNGAESFADMAKELAKRMEN
RKWWQL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaattctttcataaacccgtcgatcaacaatcttcatcgacgtcagctcat
tctccgagggcccagaagggagtattgggtgcagctgatttggtcccacgggtcactctt
cactatgggatcccgcctactgcatctattcttgcttatgaccccatacaaagtctttta
gctgtgggaacactggatggtcgaataaaagttcttggtggtgacagcattgaagctatt
ttcacttctactaaaccattgccatttaaaaatttggagttcttacacaatcaaggtttt
ctagtaagcatatcgaacgataatgaaatccaggtttgggaattggagcgtaggcagtta
gtttctactttacgatgggagtccaatataacggccttctctgtactttatggcacctgc
tacatgtatgtaggaagtgaatatgctatggtggctgtcttaaagtttgatgctgaagaa
agaaaaatcaaactattaccctactatcttacttcaaatgtcatatctgaggtaactggt
gtggaactgcctgatcaaacttctgttgttggagttctccttcaaccttgttctcttgga
aatagagtgctgattgcatatgaaaatggcttgcttgttctctgggatgcttctgaagat
cgagctgtgttagtaagaggtcacaaggaccttgaattgacggagagtaacataactaat
cactctacagatgtatcagaccttgaattggagaaagaaataagctctctttgttgggta
acaagtgatgggtcgatcctagctgttggctatgttgatggagatatcttattttggaat
ttttcaaatgttacctcttccaaagatcagcaagttaatcaatctcgtaataatgctgtc
aagcttcagttatcatcaggcgatagaagactgcctgtgattcttttgcgttggtctcca
agtgagttgcaaaatcacaagggggagctttttgtatatggtggtgatgaaatcggatct
ccggaagtgcttactattctaagcctcgattggtctcctggaatgaaaagcttaaaatgc
atggaacgtgttgatctaacacttgatggttcttttgcggatatcgttttatcacctaac
gttggtgaaacgaaaagaggcactttcctatttgtactggccaatcctggacagctgcat
gcttatgataatgcttacttgtctagcataatgtctcagctaaagaaaatatcttctggt
tctggcctgcaatatcctatggtaatacccaatattgaaccacgtgtaatggttgcgaag
ttgggtttcattcatagagagaaaacggtcttcagggctctgaatgaggttccgagggat
acaatgtggcctttgactggtggtataccatgtcaactccatgatgctgaagattatcag
gttgagagagtttatatagctggttaccaagatggctcaattcgaatatgggatgcaaca
tatccatccttctcacttattttctcttttgagcctgaggtaattggtttaaatattgct
ggtttaagtgcttcgatatcagctttggacttttgctcggtcactctatccgtagctgcg
ggcaatgaatgtggtctggttcgtctttacaaactaattgggagctcggaaggggcaagt
ttacactatgtgacagagactaagaacgaagttcataatacgcatggtggagaaggaatc
caatgcgcagctgtgttttctgttgtaaattcttctgttagcactctaagttttgagaac
tgtggagccgtacttgctgttggatttgaatgtggacaggttgcagtgtttgatactaac
acattatcactgctgtatctgacaaatgacgtgtcgaactcaagatctccagtcatatct
ttggcgatcaaatcatttccagatacaaatcacttggaggctcgttctgatgagtctatt
ccacccaaaaagggaattttgctcgcaatgaccaaaaattcatatttagctgtcctcgat
agtaccaacggtgaaatcatcagctttcaatcaacatatgcaaaggagtcgagttcaata
tctatgaatattattgagagtgactacttatcacctgaagcactcagtgtagctcatgca
ccgagcaccccaaagatcactggagaaagctattctgtacctgccaatgcccactctgga
cgtacattgcatgaagttggagccgatacctccagtggaattgctaacttgtttgttttg
ctttgctgtgagacagctttatacctgcacccattgaagcttatgaatgagggtgagaat
aagtttttacagaaagtgaatctttcaaagccatgttgttggactacaatgttaaagaag
gacggcaaagtgtctggcttggttgttctttatcaaaatggtgtggttgagatcagatcc
ttccaaaatcttgagcaagtggtgtgggaaagttccttgacctcaattctacggtggagc
ttcaagacaaacatggagaaaacaatatgttcttctgatgatggccaaatcatgctgtta
aatgggactgagtttgctgtagtgtctctattgatctacgaaaatgctttcaggatcccc
gagtcgttcccttccctccacgacgaagtccttgcagctgctacagaggcctcgaataac
ttttacccaagccagaacaaacaagatgctactgtttctgggtttttagatagtgttgtt
aagggcttcaagggcggtaaagtggaaaacaatgtggaccctttaagcctttgtaaactg
aatgattcacatctggaaagtttgttctcatatcctccatttttaaagccttccaaaggt
gtcacagatgagctaggcgtcattgagcttgacatagatgacattgaaattgatgaacct
ttagtcgtgcggttttcaccgaagaaaaacaagaatgaaaaggaaggcaagaggtcggag
aaggaaaagttatttgaaggtggtagtactgactcacaacctaagatgaggacagctgaa
gaaattaaggccaaatacagaaaagctgagagtgcttctacggcagctgaagaagccagg
aataagctattagaacgccagcagaagcttgataaactcagggaaagaaccgaagaactg
cagaatggagctgagagctttgcagatatggcgaaggaactggcaaagagaatggaaaat
cgtaaatggtggcaactgtga
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