Cucurbita pepo subsp. pepo (vegetable marrow): 111801793
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Entry
111801793 CDS
T05351
Name
(RefSeq) phytochrome E-like
KO
K12123
phytochrome E
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
111801793
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
111801793
NCBI-ProteinID:
XP_023541717
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Position
LG09:7209268..7216274
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AA seq
1130 aa
AA seq
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MEKNRSGERGAMAFSSSADSNMRARLSNTTSTGNRAAALVQYNADAGIMSKFEQSDASGE
SFNYSRSVLEANESVPEEQIAAYLSRIQRGGLVQSFGCLLAIDESSFKIISYSENCFEIL
GLHDEFESAQGKGLIGVDMRALFTPSSGASLAKAASFREISLLNPVWVYSRTTQKPFYAI
LHRIDVGIVIDLEPTRSFDPALSLAGTVQSQKLAVRAISRLQALPGGDIGVLCDTVVEDV
QKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRIRMI
CDCHAKPVQVIQSDELKQPLCLVNSTLRSPHSCHLQYMSNMGSLASLAMAVVMNSDDSPT
RLWGLVVCHHTSPRYVPFPLRYACELLIQAFGLQLYMELQLSLQLTEKKVLKTQTFLCDM
LLRGSPCALLMQSPSIMDLVKCEGAALYYNGACCLLGITPTEAQVKDLVEWVLTNHGDST
GLSTDSLADAGYPEAASLGDAVCGMAAARISSKDFLFWFRSQAAKEIQWGGAKHHPDIKD
DGGKLHPRSSFKAFLEVAKSRSLPWEVQEINAIHSLQLIMRESFSNTRDSDSKVEASAQP
SDTVIQDIDELSSAACEMVRLIETATVPIFGVDSTGVINGWNAKISELVGLQTSEALGKS
LVNEIVHEDSRGTVGDLLSHALQGKEDNNVELKLRSFRSDKEKSTIYIVVNACTSRDYTN
KIVGVCFVGKDVTPEKGVMDKFIRLQGDYKAIIESLSPLIPPIFASDVNGYCCEWTAAME
KLSGWRKDEVIGKMLAGEIFGNFCRLKGLDTLTSFMILLYQGIDGQETEKFPLGFFNKDG
NYEEVLLTSNKRTDAEGNIIGCICFLQIVQPNLHGVSEGLGVGDREGNLQLKELTYIKQE
MKNPLNGIRFTHELLVNSGITENQKLFLDTSGACERQIMTIIEDMDFRSLEGGQVEINRE
EFILGSVLDAIICQIMTVVREKNIQLFHEIPEEIKVLNLCGDHIKLQLVLSDFLLNVVQY
APVPDGWVEIKISSGLKLIQDGNEHIHLQIRMSHPGQGLPPELIQDMVGGGQQWTSKQGL
ALNLSRRLLNKLSGNIRYVREQTKCYFIIDLELKLRRSRGSMEATTSQGT
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatcggagcggagaaagaggagcgatggcgttttcgtcctcggcggatagc
aatatgagggctcgtctgagtaacaccactagcaccggcaacagagctgccgcacttgtg
caatacaatgccgatgctggaattatgagcaagtttgagcaatcggatgcctctggtgag
tcttttaattattcgaggtcagttcttgaagctaatgaatctgttcccgaagaacaaatt
gctgcttatctgtctaggattcagaggggtgggctggttcaatcgtttggttgtttgctt
gcgattgatgagtctagttttaagattattagctatagtgagaactgttttgaaattttg
gggttacatgatgaatttgagtcggcacaggggaagggattgattggggttgatatgaga
gctctgtttacgccttcctccggtgcttctttggctaaagcagcttctttcagggagatt
tcgttgttgaatccggtttgggtctattctaggactactcagaagccattttatgctata
ttgcataggattgatgtggggattgtgattgatttagagcctacacgatcttttgatcct
gcattgtcgcttgctggcacggttcagtcgcagaaactagcggttcgggcgatttctagg
ctgcaggctctacctggtggtgatataggtgttctatgtgacacggttgtggaagatgtg
cagaagcttacagggtatgatagagtgatggtgtataagttccatgatgatgaacatggt
gaagtagtgtcagaaatcagaaggtctgacttagagccatatcttggtttgcattatcct
gccattgatatacctcaagctgctcggtttttgttcaagcaaaaccgcatcaggatgatt
tgtgattgccacgcgaagcctgtgcaggtcattcaaagtgatgagctaaagcagcctctt
tgtttggttaattcaacacttcgatcgccccatagctgtcatttgcagtacatgtcgaat
atgggttccttagcctcgttagcgatggctgtagtcatgaatagtgatgactcgccaaca
cggttatggggcttggtagtgtgccaccatacttctccgcgatatgtccctttcccactt
cgttatgcttgtgagcttctcatccaggcatttgggctgcagctttacatggagcttcaa
ttgtcattacaattaacagagaaaaaggttctcaagacacaaacattcctctgcgacatg
cttcttcgaggctccccatgtgcattgctgatgcagtctcctagtataatggatcttgtg
aagtgtgagggtgcagcattgtattataatggggcatgttgtttacttggtataactccg
actgaagcacaagtcaaagatcttgtagaatgggtacttactaaccatggggattctacg
ggactgagcacggatagtttggctgatgctggctaccccgaagctgcttctctaggtgat
gcagtgtgtggtatggcagctgcaagaattagttccaaggatttcttattctggttcagg
tctcaggcagcaaaggaaatccaatggggaggagccaagcatcatccggatattaaggac
gatggtggaaaactgcacccaagatcatcatttaaagcgtttcttgaagttgcgaagagt
agaagtttaccttgggaagttcaagaaataaatgccattcactcgttgcagcttattatg
agggagtctttttctaacactagggacagtgattcaaaggtagaagcttctgcccagccg
agtgacactgtaatccaggatatcgacgaactcagttcagcagcttgcgaaatggtgagg
ttgattgaaacagcaactgttccaatttttggggttgattcaactggtgtgatcaatgga
tggaatgctaaaatttctgaactcgtaggattacaaactagtgaagctttgggcaaatct
ctggttaatgaaattgttcatgaagattcacgtggaactgttggagatttactttcccat
gctcttcaaggtaaggaagacaacaatgtggagttaaaactgagaagttttcgatctgat
aaagaaaagtctaccatttatattgtcgttaatgcttgcacaagtagggattacacaaac
aaaattgtcggggtttgctttgtcgggaaagatgttacgcccgagaaaggtgtgatggat
aaatttatacgtctgcagggagattataaggctattattgaaagtttgagtccattgatc
ccaccgatatttgcttcggacgtgaacggttactgctgtgaatggactgcagccatggaa
aagctttctggttggagaaaagatgaagttataggaaaaatgctagctggggagatcttt
ggaaatttttgtaggttgaaaggtctagatacgctcactagttttatgatccttttatat
caaggtatcgacggtcaagaaaccgagaagtttccgttaggatttttcaataaggatggg
aactatgaggaggttcttttaacatcaaacaaaagaactgatgcagaaggtaacatcatt
ggttgtatctgcttcctgcaaattgttcagcccaacttgcatggggtctctgaaggactt
ggtgtgggcgacagagagggaaatctgcagcttaaggagttgacttacataaagcaggag
atgaaaaatcctttaaatggcattagatttactcatgaacttcttgtaaattcaggcatt
acagaaaaccagaagctctttctcgataccagtggcgcatgcgagagacaaatcatgacg
atcatagaggatatggacttcagaagtttagaaggaggccaagtagagataaacagagaa
gaatttatcctcgggagtgtgctggacgccattatctgtcaaatcatgactgttgtcaga
gagaagaacatacaactttttcatgagattccagaagaaatcaaagtgttaaatctttgt
ggcgatcatattaagcttcagttggttttgtcagatttcttgcttaatgtcgtgcagtac
gcgcctgttccggatggttgggttgaaatcaaaatttcatctggtttgaagctcatacaa
gatggaaatgaacatattcacttgcagatcagaatgtctcatccaggtcaaggtctgcct
cctgaactaatccaagatatggttggaggaggtcagcaatggacttcaaagcaaggcctt
gctctaaacctgtcacgtagacttctcaataagttgagcggtaacatacgctacgttaga
gagcaaactaaatgctacttcatcatcgacctcgagctcaaattaaggcgctcgagaggg
tcgatggaagctactacaagccaagggacatga
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