Cucurbita pepo subsp. pepo (vegetable marrow): 111801820
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Entry
111801820 CDS
T05351
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1-like
KO
K12198
charged multivesicular body protein 5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111801820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111801820
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
111801820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Prefoldin
Med4
DUF1319
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
111801820
NCBI-ProteinID:
XP_023541762
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Position
LG09:complement(2176503..2179423)
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AA seq
237 aa
AA seq
DB search
MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA
VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggtttttggcgttaagaaagacaaagaaccgcctccgtctattgaagatgcc
tccgaaagaattaataaaagaggcgaatcagttgatgaaaagataaagaagcttgatgtc
gaactcagtaggtataaggaacagattaagaaaacaaggcccggtcctgctcaagaagct
gttaaagctcgagcgatgagggttttaaagcaaaaacgaatgtatgaaggacaacgtgat
atgctgtacaatcagacgtttaaccttgaccaagttgcatttgcctcagagggcataaaa
gacgctcaacaaacgatgtcggccttgaaatctgccaacaaggagttgaaaggaatgatg
aaaacagtgaggatacaggacatagacaacttgcaagacgaaatgatggatatgatggat
gtgagcaatgaaattcaagagactcttggtaggagctataatgtgcccgatgacattgac
gaggatgaacttttgggcgagcttgatgccttggaagcagacatgggatttgaaactgag
gctgatggggttccatcttatctccagcccgacaaggaatccgacttggaaggagaactc
aatttgccttcagctcctacagggcaggcagcagttcctgctggcagaaccaatgcacag
gctgaggatgaattggggttaccagctgttcctcgcgcatcccttcgtgggtaa
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