Cucurbita pepo subsp. pepo (vegetable marrow): 111801893
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Entry
111801893 CDS
T05351
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111801893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111801893
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111801893
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
111801893
NCBI-ProteinID:
XP_023541883
LinkDB
All DBs
Position
LG01:1238909..1241776
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AA seq
339 aa
AA seq
DB search
MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
RYSLNGRDVHGSRIIVEIAKGVPRGPGGSRESREYLGRGPPGTGRCFNCGIDGHWARDCK
AGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRS
PVKRDRSLERSEKRSRSPRGGRLSPKRHSLSPPPSKALKRSPTPDVRSPEEARRSPSPGN
RDSPRGRSRSRSRSRSRSRSPRGRSRSRSPRGRSRSRSPRGRSRSPMDEAEDFNGGGSRN
YRKEENGYSRSPSPLPREERSPVNDEDANGSPRGGSESA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgacgatcgatacggtggtacgcgactatacgttggacgcctttcttca
cggactaggtcgcgtgatctggatgacctgttcagtcgttatggaagagtacgcgatgtg
gatatgaagcgagactatgcatttgttgagtttagtgacccccgagatgctgacgatgca
agatatagtttaaatgggagggatgttcatggaagtcgaatcattgtggaaatagctaaa
ggggtaccccgtggtcctggtggatctcgagaatctcgtgaatatcttggacgaggccct
cctggaactgggcgttgttttaattgtgggattgatggccactgggcaagagattgcaag
gctggggactggaagaataagtgttatcgatgtggggaacggggtcacatagagaagaat
tgccagaacagtcctaagaagttgaagcgtggaagttactcacgttcaccaagccctcgc
cgtggtagaagtcgaagtcgtagttacagcagaggtcgtagctacagtcgatctagatca
cctgtaaaaagggatcgaagtcttgaacggtcagaaaaaagatcgaggagcccaagagga
ggcaggctaagccctaagagacacagtttgtcaccccctccttcaaaagctctgaagcgt
agccccactcctgatgtgaggagtccagaagaagcaagacgtagcccgtctcctgggaac
cgagacagtcctagaggaagaagcaggagcaggagcagaagcagaagcaggagcaggagc
ccaaggggaaggagcagaagccgaagcccgagaggaaggagcagaagccgaagcccgaga
ggaaggagcagaagcccaatggatgaagctgaggacttcaacggtggtggaagcaggaat
tacaggaaggaagagaacgggtacagtcgcagccccagtccgttgcccagagaagaaagg
agtcctgtaaacgatgaagatgccaatggttctccgaggggcggtagcgagtctgcataa
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