Cucurbita pepo subsp. pepo (vegetable marrow): 111801906
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Entry
111801906 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111801906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111801906
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111801906
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111801906
NCBI-ProteinID:
XP_023541901
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Position
LG09:complement(226270..230375)
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AA seq
669 aa
AA seq
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MNSALHRGLASSSHGSRGIEKSLKSPSCNNLMPEGLRSGKRILDPQGPFLQSWNKIFVLS
CVVAVSLDPLFFYVPVIDNRNKCLRLDEKVETVACILRLFTDLFYVVHIVFQFRTGFIAP
SSRVFGRGVLIEDSWAIAMRYLSSYFLIDIFSVLPLPQVMILINIHKIRGLRSWNTENLL
KLAVLCQFVPRFLRIYPLYKEVTRTSGILIETAWAGAAFNLFLYMLASHVFGSIWYLCSV
EREAQCWHDACSKHPGCNLTSLYCGYNYSHEGNLFLNASCPIEKPNVGIFNFGIFLQALQ
SDIGESHFPKKFLHCFWWGLRNLSALGQNLTTSTCNWENCFAILICISGLVLFASLLGNL
QMCWRSTNTRVEEMRVRRRDVEQWMSHRLLPENMRERVRRYEHYMWQDTRGADEHNLLHN
LPKDLHRDIKRHLCLVLLMRVPMFEKMDDQLLDAMCARLKPVLYTEESCIVREGDPVDEM
LFIMRGKLLTMTTNGGRTGFFNSDFLMAGDFCGEELLTWGLDPHSSTNLPISTRTVRSLT
EVEAFAFKPDDLKIVATQYRRLHSKQLRQIFRFYSQQWRTWAACFLQAAWRWHQRKKLRE
CVKEEESRLKVVLASIDERSPSLGATIYASRFAANMLRARRRNSSRKARMSMLLQKPAEP
DFTLEDNNS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctctccacagagggttggcatctagttctcatggaagtagaggaattgag
aagtcattgaaatctccttcttgtaataatctcatgcctgaaggcttgcgctccgggaag
agaattcttgatccacaagggccttttcttcaaagttggaacaagatatttgtgctgtct
tgtgtggttgctgtttcattggatcctctgttcttttatgttcctgtgattgataataga
aacaagtgtcttaggttagatgagaaagtggagactgtagcctgtatattgcgattgttt
acagatttattctatgtcgtgcatatcgtttttcagtttcgtacaggatttatcgctccc
tcttcccgagtgtttggaagaggtgttttaatagaagattcatgggcaatagcaatgagg
tatctgtcatcatactttctaattgacatattctcagtcctcccacttccacaggtgatg
attttgataaacatccataaaattagaggtttgagatcgtggaatacagagaacttgctg
aaacttgctgtattatgtcaatttgtgccaaggtttcttcgaatctatcctctgtataaa
gaagttacaaggacctctggcatactcattgaaactgcttgggcaggagctgcgtttaat
ctctttctctacatgctagccagtcatgtatttgggtcaatctggtacttatgttctgta
gaacgagaagcccaatgctggcatgatgcttgtagcaaacatcctggctgtaaccttact
tccttgtattgtggctacaattacagtcatgaaggaaacctattcctcaatgcttcttgt
ccaatcgaaaagccaaatgtaggaatctttaactttggaatattccttcaagcccttcaa
tctgatattggggaatcacactttcccaagaagtttcttcactgcttttggtggggctta
aggaatctaagcgctttgggtcaaaatctcactacaagtacttgcaattgggaaaactgc
tttgccattttgatttgcatctctggcctagtgttgtttgcgtctctccttggcaacctg
cagatgtgttggcgatccacaaacacaagggtggaggagatgagagtgagaaggagagat
gttgaacaatggatgtcgcatcgtttactccctgagaatatgagggagcgggttcgaagg
tatgaacattacatgtggcaggataccagaggcgctgatgaacataatctgctgcataat
ctgcctaaagacctccatagagatattaagcgccatctttgcttggttttgcttatgcga
gttccgatgtttgaaaagatggatgaccaattgttggatgcaatgtgtgcacgtctaaag
cccgtgttgtacacagaagaaagctgcattgttcgggaaggcgatccagtcgatgagatg
ctcttcatcatgcgaggcaagctcttaaccatgactacaaatggagggagaactggtttc
ttcaactctgatttcctcatggctggtgatttctgtggagaagagttactgacttggggt
ctagaccctcactcctcaaccaatctccccatttcaactcgaaccgttcggtcgctcaca
gaagtcgaagcatttgcctttaaacccgacgacttgaaaattgtagccactcaataccgt
aggcttcacagcaagcagctgcgccagattttcagattttactcacagcaatggagaacc
tgggcagcttgtttcttacaagcagcatggaggtggcatcaaagaaagaagctcagggag
tgtgtgaaggaagaagagagtaggttgaaagtcgtactggcttccatcgacgagcggtca
ccgagtttaggcgccaccatttatgcatctagatttgcagccaacatgcttcgggcgagg
agacgaaacagttctaggaaagctaggatgtccatgctgcttcagaagccagcagagcct
gattttaccttggaagacaataactcttaa
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