Cucurbita pepo subsp. pepo (vegetable marrow): 111801946
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Entry
111801946 CDS
T05351
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250
Viral life cycle - HIV-1
cpep03272
Virion - Hepatitis viruses
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111801946
03272 Virion - Hepatitis viruses
111801946
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111801946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111801946
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111801946
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
111801946
Exosome [BR:
cpep04147
]
Exosomal proteins
Proteins found in most exosomes
111801946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
MYO6_lever
Spc7
RAD24_helical
HAUS1
Motif
Other DBs
NCBI-GeneID:
111801946
NCBI-ProteinID:
XP_023541958
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Position
LG09:3107073..3111144
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AA seq
402 aa
AA seq
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MMPSPAHSDPSPPNSQVILQFLSSVLSQRGPYAEDTKWLIRQHLVSLTTAFPSLVPRTAT
FTHNDGRSVNLLQSDGTVPMSFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRHH
PHVNPSGMVSIPYLQDWIYPSSNLVELVRNLSVMFGRDPPLYSQRRPNPSPSHNPNPSPS
PSSSFGRNSANSSIASNMGAAAFQRPVIPPRGYPPSHTEDPNEVFKRNAINKLVETVHND
IVGIRKTMEAEMEGLFSAQGALKQREEELNKGLKEMQDEKEALEQKLQMVLMNSDVLEAW
VRENEGMISSDFEVDDAFECVDVLSKQILECTASDLAIEDAIYSLDKAVQDGAIQFDQYL
RNVRLLSREQFFHRGTAAKVRESQLQAQVANMASRISQYNNG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtcgccggctcactccgatccctcgccgccgaattcacaggtaatcctacaa
ttcctcagctccgtcctctctcagcgtggcccctatgccgaagataccaagtggctgata
cgccagcacttagtctcactcaccaccgcgttcccatcgttggtccctcggactgcaact
ttcacgcacaacgatggccgctccgtcaatcttctgcaatccgacggcaccgttcccatg
tccttccaaggcgtgacctacaatattccggtcgttatttggctcatggagtcgtatcct
cgacatcctccttgcgtttacgtgaatccaactcgagatatgatcattaaacgccatcat
cctcatgtgaatccctccggtatggtatcgattccttatttgcaagattggatttatccg
agctctaatttggttgaattggttcgtaatttgagcgttatgtttggtcgtgatcctcca
ctttattctcaacggagaccaaatcctagccctagccataaccctaatccttctccgagt
cctagctctagttttgggcgtaatagtgctaattcttcgattgcttctaatatgggggct
gccgctttccaacgccctgtaattccgccgaggggttatccaccgtcacatactgaagat
cccaatgaagttttcaaacgaaacgcgattaacaagcttgtggaaacagttcataatgat
attgttggcataagaaagactatggaggccgagatggaaggacttttcagtgcacaggga
gcgttgaaacagagggaggaagagctaaataaaggcttgaaagagatgcaagatgaaaag
gaagctttggagcagaaattgcagatggttttgatgaattctgatgttttggaagcttgg
gtgagggagaatgaggggatgattagcagtgatttcgaagtagatgatgcttttgaatgt
gttgatgtgctttcaaagcaaattcttgagtgtactgcttcagatttggcaatagaagat
gctatatattcattggataaggctgtgcaagatggagcaattcaatttgatcagtacttg
aggaatgtgaggttgttgtcacgggagcagttcttccaccggggcaccgctgctaaagtc
agggagtctcaattgcaagctcaagttgctaacatggcttcccggatttctcaatataac
aatggctga
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