Cucurbita pepo subsp. pepo (vegetable marrow): 111801970
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Entry
111801970 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111801970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111801970
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111801970
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111801970
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
111801970
NCBI-ProteinID:
XP_023541988
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Position
LG09:complement(88799..91845)
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AA seq
331 aa
AA seq
DB search
MDLDSIECVSSSDGLDEDDIHLHHTLHPYSHSHHHPELSASKPRNGNNNSAVNDPTATAP
STSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV
AESLELPCKYYSLGCPEIFPYYSKLKHEALCNFRPYSCPYAGSECSAVGDIPFLVAHLRD
DHKVDMHTGCTFNHRYVKSNPKEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL
RFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSG
GDRKELKLRVTGRIWKEQNADAGACIPNLCS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatagtatcgagtgtgtctcgtcgtccgatggtctcgatgaggatgacatc
catttgcaccacactcttcatccttattctcactctcatcatcaccccgagttgtcagca
tcgaagcctcgtaatggtaacaacaacagcgctgtgaacgaccccactgccactgcgccg
tcgactagcgtccatgaattgctcgaatgccctgtctgcactaattctatgtaccctccc
atccatcagtgccacaatggacataccttatgttctacttgtaaaacacgggttcataat
cgctgccctacttgtagacaagagcttggagatattaggtgcttagcactggagaaggtg
gcagagtcgcttgaattgccttgcaagtattattccctgggatgccctgagatatttccg
tactatagtaaacttaagcatgaggctctatgcaacttcagaccctatagttgcccgtat
gctggctcggaatgctctgctgttggggatattccctttcttgtcgcccatctgagggac
gatcacaaggtggacatgcacactggatgcacatttaaccatcgctatgtgaaatccaat
ccaaaggaagtggagaatgccacttggatgcttactgtttttcattgtttcggtcaatat
ttctgccttcactttgaagcctttcagcttggcatggccccagtctacatggctttcctt
cgattcatgggagatgagaatgaggcacgaacctacagctacagtctcgaagttggtgga
tatgggcgaaaactgatatgggagggtacaccacgaagtattcgagatagtcatcgaaaa
gtcagggacagccacgatggattaattattcaaagaaatatggctcttttcttctcaggc
ggggatagaaaggaactgaagctaagagttacaggaaggatatggaaggaacaaaacgca
gatgctggagcctgcattccgaacctttgtagctaa
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