Cucurbita pepo subsp. pepo (vegetable marrow): 111802110
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Entry
111802110 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111802110
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111802110
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111802110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
FANCL_C
HydF_tetramer
Motif
Other DBs
NCBI-GeneID:
111802110
NCBI-ProteinID:
XP_023542126
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Position
LG09:complement(9074349..9078952)
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AA seq
324 aa
AA seq
DB search
MAIRGIDFKWYDGFFLSMLATSIIIVTINWRRYNTCRYPLHVWIVVDYTSVFVFRLLLFI
DNALSAGMGLDFGWHQQYAQFCGRVMVLSILSIFLYPFLCAWTVIGTLWFRDAKDCLPEE
GQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLLRAQQGVPVSEYGVLVDMIRVPDW
AFEAAGLEIRGVGQDAMGYHPGLFLTSAQREAVEALIQELPKFGLKAVPTDCSECPICLE
EFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLNALSNLHLDTEQTSA
NRPSATHFDSVENGSSPVPSASRH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgagggatcgatttcaaatggtacgatggattcttcttgtcaatgcttgct
actagcataataattgtgactatcaattggaggcggtacaatacatgtagatatccgttg
cacgtatggatcgtggttgattatacctctgtgtttgtttttcgccttttgctgttcata
gataatgcactctcagctggaatgggattggattttggatggcaccaacaatatgctcag
ttttgtggaagagttatggttctttctattctctctatattcctctacccgtttttatgt
gcgtggactgtaatcggtaccctatggtttcgagacgctaaagactgtttgcccgaagaa
ggacagaaatggggcttcctcatttggttgcttttcagctactgtgcccttctttgcatt
gcttgcatgtcagtgggaaagtggttagcgcgtcgacaagcacacttgttacgtgcccaa
caaggcgtccccgtgtctgaatatggggtacttgttgatatgattcgggttcctgattgg
gcgtttgaagctgcaggacttgaaatacgaggcgttggtcaagatgctatggggtaccat
cccgggctgttcttaacctcggctcagcgggaagctgtggaagctctcatccaggaactt
ccgaagttcgggctgaaggcggtcccgacggattgcagtgaatgcccgatttgcctcgaa
gagttccatgtagggaatgaggttcgaggtatgccgtgtgctcacaacttccatgtcgaa
tgtatcgacgagtggcttcgtctgaatgttaaatgtcctcggtgccgctcctccgtcttc
ccaaatctcgacctcaatgctctttctaacctgcacttggacacagaacaaacatctgcc
aatcgaccttcagccactcatttcgacagcgtcgagaacggtagctcgcccgtgccatct
gcttctcgacattga
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