Cucurbita pepo subsp. pepo (vegetable marrow): 111802175
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Entry
111802175 CDS
T05351
Name
(RefSeq) auxin response factor 6-like isoform X1
KO
K14486
auxin response factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111802175
SSDB
Ortholog
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GFIT
Motif
Pfam:
ARF_AD
B3
BRWD_AD
AUX_IAA
At5g26805_C
Motif
Other DBs
NCBI-GeneID:
111802175
NCBI-ProteinID:
XP_023542208
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Position
LG09:6895675..6904280
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AA seq
902 aa
AA seq
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MRLSAAGFSPQAPEGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE
VDTQIPNYPSLPPQLICQLHNLTMHADADTDEVYAQMTLQPLSAQELKEAYLPAELGTPS
RQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSPFPLRLKRQWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGNGVS
PWMHPRLDPSMVGMQSDVYQAMAAAALQEMRAIDYSKLAPASMLQFQQPQGLPCQPSTLM
QPQMLHQSQSQHAFLQSVQEHQQHSQSQTQTQSHHLQPQLQPEPSFNNQQPQHQQQPRQP
QPQPPPQPQPQPLVDHQPIPCTIPAISQFASCSQSQSPSLQTVPSLCQQPSFSDSNGNPV
TSPTVSPFHSLAGSFVQDESSQLLNIQRANSVIPSAGWPSKRSAIDPLSTGASQYFLPQV
ESGMSQNTVALPPFPGRECAIGDRDEGSDPENHVLFGVNIESSSLLMQNGMSNLRGVGND
NVSTTLPFSSNYMSSSGTDFSVNPTTNCIDESGFLQPHENVGQVNQPNGTFVKVHKSGTY
SRSLDITKFNNYLELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFV
NSVWCIKILSPDEVQEMGKRGLELLNSMPIQRLSNNTCDDYGSRQDSRNLISGITSVGPF
DY
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctctgcggctggttttagtcctcaggctcctgaaggtgagaggagggtcctg
aattctgagctttggcatgcgtgtgcgggtcctcttgtttctcttccggctgttgggagt
cgggttgtttattttcctcaaggacatagtgagcaggttgctgcatctaccaacaaagag
gtggatactcagatcccaaattacccaagtttaccgccacagctcatctgtcaacttcac
aacttgacaatgcatgcggatgctgacactgatgaagtatacgctcagatgactttgcaa
cccttgagtgctcaagaattgaaggaagcctaccttccagctgagttgggcactccaagt
aggcagccaacaaattacttttgcaaaactttgacagccagtgataccagcacacatggg
gggttttcggttcctcgccgtgctgctgaaaaagtatttcctcctttggacttctccatg
cagcctccagcccaagagctgattgcgagggacctacatgataatgagtggaaatttaga
catatatttcgtggccagcctaaaagacaccttctaacaactggatggagtgtctttgtg
agcgctaaacgactcgttgctggagatgctgtgctttttatctggaatgaaaagaaccaa
ttactcctcggaatcaggcgtgcaagtcgaccgcaaaccgtgatgccttcatctgttttg
tcgagtgatagcatgcatttaggactccttgctgctgcagcccatgcagctgctaccaat
agtcggtttaccatattctttaacccgagggctagcccttcagagtttgtcataccactg
gccaaatatgtgaaggcagtctaccatactcgtgtttctgtcgggatgcgctttcggatg
ctgtttgaaacagaagaatcaagtgttcgtcgctacatgggaacgatcactggcattagt
gacttggatcctgtaagatggcaaaattcgcattggcgctcggtcaaggttggctgggat
gagtcaacagcaggagagcggcagccaagagtgtcgttgtgggaaatcgaaccattaaca
acatttccaatgtatccatcaccgtttccacttcgactgaagcgacaatggccaaccgga
ctgccttcgtttggcatcaaggatagtgacctcggaatgaattctccgttcatgtggcta
cggggagataacagcgatcgtggcatccagtgtctaaactttcagggaaatggggtctca
ccatggatgcatccgaggcttgatccatccatggtcggtatgcaatccgacgtgtatcaa
gccatggctgctgcagcgcttcaggagatgagagcgatcgattattccaaactagcgcct
gcatcgatgctgcaatttcagcagcctcaaggtctcccttgtcagccttcaactttaatg
cagcctcagatgttgcatcagtctcaatctcagcacgcgtttctgcaatccgttcaagaa
catcagcagcattctcagtcccaaactcaaactcagtcacatcaccttcagccacaattg
cagcctgagccgtcattcaataatcaacaaccgcagcatcaacagcaaccaagacagcca
cagccacagccaccaccacagccacagccacagccactggttgatcatcaaccgattcct
tgtacaatccctgctatatctcagttcgcttcatgttcacaatcccaatcaccgtccctg
caaaccgtcccttccctttgccaacaaccaagtttttccgattccaatggtaaccctgta
accagtcctactgtttccccattccatagtcttgcagggtcatttgtccaagacgaatcg
tctcagctgcttaacattcaacgagcaaattcagtaattccttcagctggttggccatca
aagaggtctgctattgaccctctctctactggagcttctcagtactttcttcctcaagta
gaaagtggtatgtctcagaatacggttgcattgccacccttccccggaagggagtgtgct
atcggtgatcgagatgagggttcagatccagaaaaccatgttctatttggtgtgaacata
gagtcttcatcccttctaatgcagaatgggatgtcgaaccttaggggagtcggcaacgat
aatgtttccacaacactacctttttcttccaactacatgagctcatccggtaccgatttt
tccgtaaatccaacgacaaattgcatcgacgaatcgggtttcttgcagcctcatgaaaac
gtgggccaagtaaaccaaccaaatggaacttttgtcaaggttcataaatcagggacctac
agtaggtccttagatataacaaaattcaacaactacctcgagctacgcagtgagcttgct
cgcatgtttggcctagaaggcgagttggaggatcctttgagatcaggctggcagcttgta
ttcgttgaccgggagaacgacgttcttctccttggggatggcccgtggccggagttcgta
aacagtgtatggtgtatcaaaatactttcacccgacgaagttcaggaaatggggaagcgc
ggtttagaacttctcaactctatgccaatccagaggctttcgaacaatacctgtgacgac
tatggtagccgacaggactcgagaaatttgatatcagggataacctccgtcggtcctttc
gactactga
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