Cucurbita pepo subsp. pepo (vegetable marrow): 111802418
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Entry
111802418 CDS
T05351
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111802418
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111802418
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111802418
04121 Ubiquitin system [BR:
cpep04121
]
111802418
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111802418
Peptidases and inhibitors [BR:
cpep01002
]
Metallo peptidases
Family M67
111802418
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
Others
111802418
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111802418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
111802418
NCBI-ProteinID:
XP_023542537
LinkDB
All DBs
Position
LG09:complement(9721900..9728598)
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AA seq
501 aa
AA seq
DB search
MRSSSERINIAACTRRLNVDNRFPLRYYYRIADNILKQADIFRAEKNIIDLYVMLMRFSS
LITETIPRHWEYGTTLKSQKNYFRKRLLDALSELEELKPAVQRKVDEINGKQRNQVNGWR
NQQQNGSLGWQSGGKQYLTDNSAAKAGRSAAREITRQGSGPQQFSYSRSIHIPLPKEETL
SRHSILGPNGLHGQWQPPIVDKGVQYPRILDLSPVEIPSLQQSIETKLTIGKDLGNLEKD
RSDIDPICTQNEDRKVHNTMETDSLISFEKVEMPAPIEIVRQPSPPPVLAEVQDLIPAMS
PQVPEVECTRDTSLSDKFVHPEASLQLHISTTMMENFMRLAKSNTAKNLETCGVLAGSLK
NRTFYVTALIIPKQESTSDTCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSVDVH
THYSYQVMLPEAVAIVMAPKDSARNHGIFRLTTPGGMSIIRQCQQRGFHSHNQPPDGGPI
YKTCTDVYMDPNLKFDVIDLR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttcttcggaaagaatcaacatcgccgcctgtacccgccggctcaacgttgac
aaccgatttcctcttcgttattactatcgaatcgccgataatattttgaaacaggctgac
atctttcgagcagagaagaacataattgatctttatgtcatgttaatgagattttcgagt
ttgatcactgagacaatacctcgtcattgggagtatggaacaactcttaaatcccaaaaa
aattattttagaaagaggctattggatgctttgagcgagcttgaagaattgaagccagca
gttcaaagaaaggtcgatgaaataaatggaaaacaaagaaatcaagtcaatgggtggcgt
aatcagcaacaaaatggctcattgggatggcagtctggtggaaagcaatatcttactgat
aacagtgcagctaaggctggtagatcagctgctagagaaattactcggcagggttcaggg
cctcaacaattttcatattccagatctatccatattccactcccaaaggaggaaacatta
tcccgtcattctattttgggtcccaatggacttcatggccagtggcaaccaccaatcgtt
gataaaggggtccaatatccacgcattttggatctatctcctgttgaaattccaagctta
caacaatccatagaaaccaaacttacaataggaaaagatcttggaaacttggaaaaagac
agatctgatatagacccaatctgcactcagaatgaagatcgcaaggttcacaataccatg
gaaacagattccttaatctcctttgaaaaagttgaaatgcctgcccctattgaaattgtg
cgacagccttctcctccacctgtgcttgctgaagtacaggacctaatacctgcaatgtca
cctcaagttcccgaggtagaatgcacacgtgatacttcattgtcagataaatttgttcat
ccagaagcttctttgcaattgcacatttcaactacgatgatggagaacttcatgaggcta
gccaagtcaaatactgccaagaatttagaaacgtgtggtgttcttgccggttcacttaaa
aacagaacattttatgtcactgcactcatcattccaaagcaggaatcaacatcagatact
tgtcagacaacaaatgaggaagagatatttgaagtgcaggataagcgctctctgttccca
cttgggtggattcatacacatcctacacagtcatgcttcatgtcgtcggttgatgttcac
acacattactcatatcaggtaatgttgcctgaagctgttgcaattgtgatggctcccaag
gatagtgcaagaaaccatggcattttccggctgacaacccctggtggcatgtcaattatt
cggcaatgccaacaacgtggctttcactcacataatcagcctcctgatggcggacccatt
tacaaaacctgtacagatgtatacatggaccccaatttgaaatttgatgtcattgatctt
cgatga
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