KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111802617
Entry
111802617         CDS       T05351                                 
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpep03009]
    111802617
Ribosome biogenesis [BR:cpep03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    111802617
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_HPS5 WD40_like Beta-prop_WDR19_1st SMC_ScpA
Other DBs
NCBI-GeneID: 111802617
NCBI-ProteinID: XP_023542817
LinkDB
Position
LG09:complement(6695000..6701343)
AA seq 511 aa
MKKNVKKNSSAPPRGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNAFVDEG
AENEEFEEETADEKRKRLANEYLEKIREIARRGKEREDEEKDDDDESGDEGGKDSLVAQI
LQQEQLEDSGRVRREIASRVLKPEARDGFEVLIKHRQSVTAVALSDDDMKGFSSSKDGTI
LHWDVDCGKGEKYQWPSYEVLKSHGVKDPQGQAARHSKVTLSLAVSSDGRYLASGGLDRH
VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNVEDRAYINTLFGH
QSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCRFISNDEFLTGSD
DGSIELWTALKKKPVYIVRNAHPSSLSYPNLETKENGAIPNGCMGNGNANLNTSHSLSAH
SWVSSVSVCRNSDLAASGAGNGFVRLWALGSDKKDVRPLYDLPLVGFLNSLTFANSGRFV
VAGVGQEPRLGRWGRIPAARNGVAVHPLKLS
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaaaaagaacgtgaagaagaatagctcggctcctcctagaggggcaaagaaggggaag
aattttccactcagtaaggatccttttttcagttctgaatcgaggaaacggaggaagatt
gttgatgatgagattgagagcggtgaatctgatgaggataatgcgttcgtggacgaaggt
gctgagaatgaggagtttgaggaagaaactgctgatgagaaaaggaagagattagcgaac
gagtacttggagaaaattcgggaaattgcgaggagaggtaaggagagggaagatgaagag
aaggatgatgatgatgagagtggtgacgaaggcggaaaggattcacttgttgcacaaatc
cttcagcaagaacaactcgaagatagcggaagggttcgtagagaaattgcatcaagggtt
ctgaagccagaagctagagatgggtttgaagtcttgattaagcatagacaatctgttaca
gctgtggctctatccgatgatgatatgaaggggttttcatcgtctaaggatggtacgatc
ttacactgggatgtagattgtggtaaaggggaaaaatatcaatggcccagttatgaagta
ttgaagtcgcatggtgttaaggatccccaaggtcaggctgcaagacatagtaaagtcact
ttgtcgttagcagtcagttctgatggtcgatatttggcaagtggaggcttagaccgccat
gtgcatatatgggatacacgtacaagagagcatattcaggcatttcctggtcatagggga
cctgtttcgtgtttgactttcaggcaagggacctcagaacttttttctggttcatttgat
cgaactgtcaagatatggaatgtagaagacagagcttacataaatacattatttggtcac
caaagtgaagtattgactattgattgcttacggaaggaaagattgcttactgttggacgt
gatcggagtatgcaattatggaaggtcccagaggagtcccgtttagtatttcgtgcacct
gcatcatccttagaatgttgccgttttataagcaatgatgagttcttaactggatcagat
gacggcagtattgagctttggactgcattaaaaaagaagcctgtttatattgtacgaaat
gctcatccttcttcattgtcttaccctaatttggagacaaaggaaaatggtgccatcccc
aatggttgtatgggaaatgggaatgccaatcttaatacttctcatagtttgtcagcacac
tcttgggtaagttcagtctcagtatgtagaaacagtgaccttgctgcatcaggtgctggc
aatggttttgttcgtttatgggctcttggaagtgacaagaaagatgtgcgaccattatat
gaccttcctctggttgggtttttgaactccttgacttttgccaattctggaaggttcgtg
gtagctggagttgggcaggaacctcgtctaggaagatggggtcgaatcccagctgctcgg
aacggagttgcagttcatccccttaaactctcatga

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