Cucurbita pepo subsp. pepo (vegetable marrow): 111802620
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Entry
111802620 CDS
T05351
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111802620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111802620
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111802620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
111802620
NCBI-ProteinID:
XP_023542822
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Position
LG09:complement(4025192..4029596)
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AA seq
402 aa
AA seq
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MFGAQLSSSAFGTPQSTPAFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNFS
STPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQQQQQQQSPLFQLPAATGFGFQTP
FAAPQSSPFPNAQLTTQMAPVAPLPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTD
PQYRAKPAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAE
RLRMTQSNVKTLQRHFLADTLPWIQRLKQKEQGLQRRLLRMMRVVEALESKGCRVPIMTG
EAELAEKLALITRQLRGSGAELSRRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLA
DMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMIDDLS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaactctcctcctccgccttcggcactccacaatcaactccggccttc
ggtactccacaatcaactccggctttcggcactccacaatcaactccggcctttggcacg
ccggcgtccactccggccttcggaactccatcggcatcccccgcatttggaaacttttcc
tcaactcctgcctttggaactccatcttcgtcgtcttttgctaccggcttcggctcgtct
cttttctccactcctttctcttctcagccttcacaacagcagcagcagcagcagcagcag
cagcagcaatcgccgttgtttcagctaccagcagcaacaggatttggtttccagactccg
tttgcagcgcctcagtccagtccatttccaaatgctcaattgaccactcagatggccccg
gtggcaccgcttcctttctccatggcagatcgagatattcaagcaattgttgaggcttac
aaggacgacgcaggaaaccctaagtatgctttcaagcgtttgttgttcagtgtaactgat
cctcaatatagggcgaaacctgctggtgtgtcggatataatgtgggctgaggctatggca
aaacttgaaggcatggaaagtgctgatagagagcgattgtggccacagcttgttcaaggt
tttaaggatttatctcagcgattgaagattcaagatgaagtcattctttctgatgctgag
agactgcggatgacccaaagcaatgtcaaaacgcttcagaggcattttctagctgatact
ctaccttggatccaaagattgaaacagaaggagcaaggtcttcaaaggcgtcttttgaga
atgatgagagttgtggaggcgctagaaagtaagggttgccgagtgcctataatgacaggg
gaggctgaattggctgagaagttagctttgataacaagacagttgagaggatctggagca
gagctttcgaggagggtgaaaaatttgcttacaattacttgtggtcaagcaaatggctct
ggtgctggtaattctatctatcttcaaggttcgacaaaaatacacgaacagagtcttgct
gatatgcaggaggtattgcagcagcagaccgaggccattgctagacttggaactgtttta
aagcgagatgttagagacatggaaattataatggctgaagacaaagagatgatagatgat
ttgagttaa
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