KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111802703
Entry
111802703         CDS       T05351                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03010  Ribosome
cpep04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    111802703
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111802703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cpep03011]
    111802703
   04121 Ubiquitin system [BR:cpep04121]
    111802703
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111802703
Ribosome [BR:cpep03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    111802703
  Archaea
    111802703
Ubiquitin system [BR:cpep04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111802703
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111802703
  Exosomal proteins of colorectal cancer cells
   111802703
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Thioredox_PDIA6_C OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 111802703
NCBI-ProteinID: XP_023542935
LinkDB
Position
LG09:complement(3398933..3399644)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaagaccatcaccctagaggtcgagagctcc
gataccatcgacaatgtcaaggccaagatccaggacaaggagggaattccgccggaccag
cagcgtctgatttttgccggaaagcagcttgaggacggccgaaccctcgccgactacaac
atccagaaggaatccacgcttcaccttgttctccgtctcaggggaggcgccaagaagcgt
aagaagaagacctacaccaagccgaagaagatcaagcacaagcataagaaggtcaagctt
gccgttctccagttctacaaggtcgatgactctggaaaggtacagaggctgaggaaggag
tgccctaatgccgagtgcggcgctggaactttcatggctaaccactttgaccgccactac
tgtggtaaatgtggtttgacctacgtttacaacaaagctggtggtgattag

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