Cucurbita pepo subsp. pepo (vegetable marrow): 111802761
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Entry
111802761 CDS
T05351
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111802761
Transcription machinery [BR:
cpep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111802761
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
111802761
NCBI-ProteinID:
XP_023543020
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Position
LG09:complement(244027..248144)
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AA seq
509 aa
AA seq
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MGVVTVSSSAARSPLRLGAIFSNHNSSSKRPSIVAFKVDKHTDTTLVSPHEQVILPVESN
NRNQKRSGKTSKSLKRVKAVFIDEATPCTWDVDYYEAAAKLENIFKLSSVTEDTDVECED
GRPKRRQQRRKKPDKRPGDGIVRNHTRRIKRLDLDKRIALKSNKEDKATPSLRKQKDTVS
EADETDDLVRNYPASTDMVSLDWKKMKIPPVLSSSEHTRLFKLVQPMKELIQVQEELQKE
LGREPTEGELVDATNMNVIQVRRQLEVGRAARNNLIKHNLRLVLFVINKYFEDFATGPKF
QDLCQAGVKGLMTAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVD
IQRAKLELSCEHHRLPTEEEIIAKVGISPERYLEVMRAIKPVYSLHSRHSTTSEEFINAI
TDVEGTGGDNQRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
REMVRKHEVKALMKLKHPARVDYLRRHLI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcagcacgatctcctcttcggctgggcgcaata
ttctccaatcacaattcgtcatcgaaaagaccatcgattgttgcttttaaagtggataag
cacactgacactactctggtctcacctcacgagcaagtgatcctgcctgtggagagtaat
aacagaaaccagaaaagatcaggaaaaacaagcaaatctttgaagagagttaaagctgtc
tttattgatgaagctactccctgcacttgggatgtggattactatgaggctgctgctaaa
cttgaaaacatattcaagcttagctctgtgacagaggataccgatgtggaatgtgaagat
ggcagaccgaaaagacgccagcaaaggaggaaaaaaccagacaagagaccaggtgatggc
atagtcaggaaccatactaggaggattaagcgactagatctagacaagaggatagcattg
aaaagtaacaaggaggacaaagcaactccttcattaaggaaacaaaaagatactgtaagt
gaagctgatgaaactgatgatcttgttagaaactaccctgcgtcaactgatatggtaagt
ttggactggaaaaaaatgaagattcctcctgttcttagttcatcagagcatacccgtttg
ttcaagttggttcaaccaatgaaggaacttattcaagtacaagaagagctgcagaaagag
ttgggaagagaaccaactgaaggagaattggtcgatgcaacaaatatgaatgtaattcaa
gtgaggaggcaactggaggttggtcgtgctgccagaaacaatctcatcaagcataatctt
cgccttgtactgtttgtgatcaacaaatactttgaagattttgcaactggtccaaaattt
caagacctttgtcaagcaggtgtcaagggactcatgacagcaatcgaccgctttgaacca
aagaggagattccggctatcaacttatgctttattttggataagacatgctattattcgg
tcaatgactctctcaagcttcacacgtgtctcatttggactcgactcggtaagagttgat
attcaaagagctaaacttgagttatcatgtgagcatcatagattaccaacagaggaagag
attattgcaaaagttggcatctcgcctgagaggtacctagaagtaatgagggctataaaa
ccagtttactctctccattctaggcactcgactacatcagaagagtttatcaatgcgatc
actgatgtagaaggtactggaggtgacaaccagcggcaaccagctcttctgaggcttgct
cttgacgatgtgcttgattctcttaagccaaaggagagcttggtgatcagacaaagatac
ggtcttgacgggaaaggaaaccgaacattaggtgagatagcaggaaatctaaatatttca
agagagatggtgcggaagcacgaagttaaagctctgatgaagctcaaacatcctgcaaga
gtggattaccttcgtcggcatttaatctga
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