Cucurbita pepo subsp. pepo (vegetable marrow): 111803068
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Entry
111803068 CDS
T05351
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111803068
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111803068
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
111803068
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Pellino_RING
Prok-RING_4
HAD_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111803068
NCBI-ProteinID:
XP_023543096
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Position
LG10:3064926..3068916
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AA seq
388 aa
AA seq
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MELNSIKDAFDRVTKKQKLSSSKSQEVVDQIHLEMEQVLHKIQFADNPECPIDLNSVFAE
LKTKLKDIAPLAQLESTQKELNAARTKYPKLVEKSFNPDISKAYRNVDFDRHTVDHIIAR
HFYRQGMFELGDCFISEAGQSESSASLRSPFQEMYQILEAMKYGNLEPAMNWALSNSNKL
KECGSDILLKLHTMQFLGILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
DCSPYSQSQLMSVANWDKIAEELIRQYCNFLGQSYESPLGVVVAAGVQGLPLLLKFMNVM
AGKKHEWQSTKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIIK
MSKNSTKSFKCPYCPTDIDSTRCRPLYF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaatagcattaaagatgcatttgatcgtgtgacgaagaagcagaaattatct
tcttccaaaagtcaagaagtagttgatcaaatccatctggagatggagcaggtgctacac
aaaatacagtttgctgataatcctgaatgtccaattgatttgaattcagtttttgctgaa
ctcaaaactaaattaaaagatattgcgccactcgctcagcttgaaagcacacaaaaggag
ttgaatgctgcccgaaccaagtatcctaagcttgtggagaaatctttcaatccagatata
tcaaaagcttatagaaacgttgactttgataggcatactgttgaccatattattgctcgt
catttctatcgccagggtatgtttgaacttggtgactgctttattagtgaggctggccag
tcagaatcttctgcctcattgaggtctccatttcaggaaatgtatcagatccttgaagca
atgaagtacgggaatctagagccagctatgaattgggctctgagtaactcaaataaactt
aaggaatgtgggtcggatattctgctaaaacttcataccatgcagttcttggggattcta
cagaagggcgatagacatgacgctttgaagtatgctaggacgtacctggctcctcttgca
tccaaccacatggctgaacttcagaagcttatggcttgcctattgtggacaggaaggctt
gattgctccccatactcccaatcacaattaatgtcagtagccaattgggataaaattgct
gaagagcttataagacagtactgcaattttcttggtcagtcctacgagagcccattgggc
gtagtggttgcagcaggggtacagggtttgcctctcctcctgaagtttatgaatgtcatg
gcggggaaaaaacatgaatggcaatctacgaagcagttgcctgtgccggtcgagttggat
agagaatttcagttccattccatctttgtttgtccagtatcgaaggaacagtcaaccgaa
gaaaatccaccaatgttgatgctgtgtggccacgtcctctgcaagcagtctatcatcaag
atgtctaaaaacagcacaaaatcgtttaagtgcccatattgtccaacagacattgattct
acgcggtgtaggccattgtacttttga
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