Cucurbita pepo subsp. pepo (vegetable marrow): 111803197
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Entry
111803197 CDS
T05351
Name
(RefSeq) nuclear pore complex protein NUP58-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111803197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111803197
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111803197
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUP58_M
Nucleoporin_FG2
DnaJ_cyano_C
DUF2491
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
111803197
NCBI-ProteinID:
XP_023543262
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Position
LG10
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AA seq
480 aa
AA seq
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MAFSLFSTPQPQQSQQLFQSQPQSQPQLFQQSSALFSQQPQQQLMQQQQQLFIFTNDKAP
ASYGTKWADLHPDSQKTLLQIEERILECRDESQRLDQCSRLYDSSVSNDGFELDASRIVQ
ELGGISTSTEHQKVLLQELMTTAKGMLWNTEVAIRSFMMIRPRFLNQSEGGASNSTAPPQ
VSGATSPIGSSGQPTSTSIAPVFYFYSGLPRKPSPFLQQTVSRFEKYLGECRQWIEELEQ
FLALDCNRSASNSSTSLFHSLPKIMSNVHEFFVHVAAKVESIHQYIDSMKAAYLADQRCR
GDGNNPFLEADRRETARQEAAAKRVHPTLHLTANTQPSTQAAGLLASSGSHGASTVQQLS
TVATPASSGGGLSLFSTPSAPSTTSSSLFMTPTASVQTSSLFSSSGARGPTTLFGSSSAP
LFNSAITPFGSTAQSFGQSASAGSSLFSTPFASGAATGSGASFGATSKSSKPKSRTARRY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcactgttctcaactccgcaaccgcagcagtctcagcagttatttcaatcg
cagccacaatcacagccgcaactttttcagcagagcagcgcattgttctcacagcagcca
cagcagcagttaatgcagcaacagcagcagttgttcatttttactaatgataaggctcct
gcaagttatggtactaagtgggcggacctccatccagattcgcagaaaaccctccttcag
atagaggaacgaattttggagtgtcgggatgaaagtcagaggctggatcagtgtagtcgc
ctctacgattcttcagtttctaatgatggatttgagcttgatgccagtcgaattgttcag
gaacttgggggaattagtacgtctacagaacatcaaaaagtactgcttcaagagctgatg
actactgcgaaagggatgctttggaacacggaagttgctattcgctctttcatgatgata
cgcccaaggttccttaatcagagtgaaggaggtgcttcaaattccactgcaccgccacag
gtctctggagcaacatcaccaataggttctagtggtcaaccgacatctacctcaattgct
ccagttttttatttctacagtgggctcccaagaaaaccatctccatttttgcaacaaact
gtttcaagatttgagaagtatcttggtgaatgtcgccaatggattgaagagttagagcaa
ttccttgccctagattgtaacaggagtgcttccaattctagcacttcattgtttcattca
cttcctaaaatcatgtcaaatgtgcacgaattctttgttcatgtggctgccaaggttgag
agcattcatcagtacattgactcaatgaaggcggcttatcttgcggaccagcgttgcaga
ggggatggaaacaatccatttcttgaggctgatcgaagggaaactgcacgccaagaagcg
gcagctaagagggtacatccaactttacatttgactgcaaatacacaaccatcaacccaa
gctgctggattacttgccagctcaggtagccatggtgcgtcaacagtacaacagttgtct
acagttgctacaccagcttcttccggtggtggattgtcactatttagcactccctctgct
ccatccactacatcatcttctcttttcatgacaccaacagcatctgttcaaacatcctct
ctgtttagttcttccggtgcaagaggtcctacaacactttttggctcgtcatctgcacca
ttgtttaattctgctattactccctttggcagtactgctcaatcttttgggcaatctgct
tctgcaggaagttcactattttcgacgccctttgcttcaggtgctgcaacaggatctggg
gctagctttggagcaacttcgaaatcatcgaagccaaagtcccgaacggcacgacgctac
tag
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