KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111803358
Entry
111803358         CDS       T05351                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03030  DNA replication
cpep03410  Base excision repair
cpep03420  Nucleotide excision repair
cpep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111803358
   03410 Base excision repair
    111803358
   03420 Nucleotide excision repair
    111803358
   03430 Mismatch repair
    111803358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpep03032]
    111803358
   03036 Chromosome and associated proteins [BR:cpep03036]
    111803358
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111803358
DNA replication proteins [BR:cpep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111803358
  DNA Replication Termination Factors
   ELG1-RFC complex
    111803358
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111803358
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111803358
  Check point factors
   HRAD17(Rad24)-RFC complex
    111803358
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Sigma54_activ_2 AAA SprT-like
Other DBs
NCBI-GeneID: 111803358
NCBI-ProteinID: XP_023543490
LinkDB
Position
LG10:complement(6439207..6446030)
AA seq 238 aa
MAKNRPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEA
IRSRCLNVRINGPTDDEIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCR
VQQYPFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQIRGKLYELLVNCIPPEIILKR
LLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG
NT seq 717 nt   +upstreamnt  +downstreamnt
atggcgaaaaacagacccattgactccaaagggaaaaggggacataaagttttggttcta
aatgacgttgacaaactatccagagaagcacagcactctcttaggagaacgatggagaaa
tatagctcgtattgtaggttaatactttgctgcaatagttcatcaagagttactgaagca
atccgttctcgctgcctaaatgtgcggataaatggaccaacagatgatgagattgtcaag
gtactagagttcattgggaagaaagaaggactgcaacttccatctggatttgcttcccgc
attgcagaaaaatcaaaccggagtttgaggagagctatactatcattcgagacttgtcgt
gttcaacagtatccttttgttagtaaccaggcaataccaccgatggattgggaggagtac
atctctgagatagcgtctgacataatgaaggagcagagccccaagagactgtaccagatt
cgtgggaagttatatgaactactggttaattgtattccaccagagatcatattgaagagg
ctgctttatgagctactcaagaaattggatgctgaattaaagcatgaggtctgtcattgg
gctgcatattatgaacacaggatgcggcttggccagaaatccatcttccatattgaagct
tttgtggcaaagttcatgagcatatacaagagtttcctcatttcaacgttcggctga

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