Cucurbita pepo subsp. pepo (vegetable marrow): 111803422
Help
Entry
111803422 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111803422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111803422
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111803422
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111803422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
111803422
NCBI-ProteinID:
XP_023543585
LinkDB
All DBs
Position
LG10:complement(8364208..8368348)
Genome browser
AA seq
309 aa
AA seq
DB search
MAMAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLE
CPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCR
YQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDG
CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEA
KKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLR
ITGRIWKEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctccaggaagcagtacctgcaaagaagtagttgattctcatccttcagtt
tcagggcatgacatagcaatgtctaaatcagagaataattctacatcttcaaaagtccta
cttggttcgagtgggaagcttggagtttattcaaccaatggcgtgcaagaactgctcgag
tgccctgtctgcacaaatctgatgtaccctccaatttaccagtgcccgaatggccacacg
ttgtgctcaaactgcaagatcagagttagcaactgctgcccgacctgtcgtcatgaactc
ggaaacataaggtgcttggcattggagaaggtagctgagtcgctggaaatcccctgcaga
taccagaatttgggttgccaagatatttttccttactacagtaagcttaagcatgagcaa
cactgtcgattccgtccttacaactgcccttatgctggatccgagtgctcggtcacgggc
gacatcccgtctcttgttgcacatctcaaagatgatcacaaggttgacatgcacgacggg
tgtaccttcaatcatcgctatgtgaaatcaaatccacacgaagttgaaaacgctacatgg
atgctaacggttttcaactgctttggaagacagttctgcttgcatttcgaggcgttccag
ctaggaacagcgcctgtttacatggcgttcttacgattcatgggcgaagataacgaagca
aagaagttcagctacagtttggaggtgggtcacaacgggcgaaaactgatatggcaagga
attccgagaggcatccgtgacagtcaccgaaaagttcgtgacagtcaagatggtctcatc
attcaaagaaacctggcactgtatttttcggggggagaaagacgagagctgaaactgaga
atcacgggtcgaatatggaaagaagaatga
DBGET
integrated database retrieval system
