Cucurbita pepo subsp. pepo (vegetable marrow): 111803494
Help
Entry
111803494 CDS
T05351
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111803494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111803494
Enzymes [BR:
cpep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
111803494
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
111803494
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
111803494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-SAK
PTP-NADK
Y_phosphatase
Y_phosphatase3
PTPlike_phytase
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
111803494
NCBI-ProteinID:
XP_023543692
LinkDB
All DBs
Position
LG10:5221994..5233220
Genome browser
AA seq
678 aa
AA seq
DB search
MDLNASPVPEEDEETFDRHEVAYSAPEDHIETGASIARREREERKRRLKRDRSIERPVHE
YQQPARDQSYPAKNQKTVRSRLPPGWLDCPAFGQEICCMIPSKVPLGDTFSDCVAPGKRY
AFKQAIHQQRVWGRKLGLVIDLTNSYRYYTTTDLNKEGIKYVKIPCKGRDSVPDNKSVNM
FVYEVSQFISRQKHSKKYILVHCTHGHNRTGYMIINYLARALSISVTQALKMFSDARPPG
IYKPDYIDALYAFYHEKKPELVVYPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENH
DDAAQVMTNDDILGDEIPEDQERAFKHFCYQMLKMNAGARANLQFPGSHPVSLNRENLQL
LRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGLVEKIHNYTL
LDGEMIIDTLPDSQKQERRYLIYDMMAINHVSVTERPFYERWKMLEKEVIEPRNYERQNI
YQSRNPQYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTH
EGLLKWKYPEMNSVDFLFEVMGDDDSQTLILFERGKRKTMEGNRVKFKDGDPSFYSGKIV
ECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYAD
RIRNDSKAAQHTNSTRRR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggacttaaatgcctcgccggtgcctgaagaggacgaagagacgtttgatagacatgaa
gtggcgtatagtgctccagaggatcatatagagactggtgccagtattgcacggcgggaa
cgagaagaaagaaaaaggcggctgaaaagagatcgctctattgagagaccggtgcatgaa
taccaacagccggcacgggatcagtcttaccctgctaaaaaccaaaaaactgttagaagc
aggcttcctccaggttggttggattgccctgcttttggtcaagaaatatgttgcatgatt
ccttccaaagttcctctgggcgacaccttcagtgattgtgtagcacctggtaaaagatat
gcatttaagcaagcgatccatcagcagagagtttgggggagaaaactcggtttggtgatt
gatttgacaaattcttatcgttattatacaacgacagatttgaataaagagggtatcaag
tatgttaagattccttgcaaggggagggattctgtacctgacaacaagtcggtcaatatg
ttcgtttacgaggtcagtcagtttatttctcgtcagaaacactcaaagaagtatattctt
gtccattgcacgcatggccataatcgcactggatatatgatcataaattatcttgcgcgt
gcactatccatttctgttacccaggctcttaaaatgttttccgatgcacgtcctcctgga
atttacaagccagattacattgatgcattatatgccttctatcatgaaaaaaaacctgaa
ttggttgtttacccacccacacctgagtggaagagatcctcagatcttgatcttaatggt
gaagcagttccggatgatgacgatgatggaggttctgctgctcctttgaatgaaaatcat
gatgatgctgctcaagtgatgacaaatgatgatatattgggtgatgagatacctgaggac
caagaacgtgcttttaaacacttctgctatcaaatgcttaaaatgaatgcgggagcaaga
gcgaatttgcaatttcctgggtcgcatcctgtgtctcttaacagagagaatcttcaactg
ctaaggcaacgctattattatgccacgtggaaagctgatggaacaagatatatgatgcta
ataaccatggatggatgctacttgattgacaggggttttaaatttagaagagtccaaatg
agatttccgtacagaaatgcaaatgatggcctagttgagaagattcacaactacacactc
cttgatggagaaatgatcattgacactctgccggactcacagaagcaagagagaagatat
cttatatatgatatgatggcaattaatcatgtttcagtcactgagcgtcctttctatgaa
cggtggaagatgcttgagaaagaagtgatcgaacctcgtaattacgagcgccagaatatt
taccagagtaggaaccctcagtatagatatgacctagagccattcagggtgaggaggaaa
gacttttggttgctctccacagttaccaaacttttgaaggagttcataccgaggctttca
catgatgccgatggtctaatatttcaggggtgggatgatgcttatgttcctcgaactcat
gagggtcttttaaagtggaaatatccagaaatgaattcagtcgacttccttttcgaggtt
atgggggacgatgattctcagacgcttattttgttcgaacgaggaaagaggaaaacaatg
gaaggaaatagggttaagttcaaagatggcgatccctccttctattcaggaaagattgtt
gagtgctcttgggattctgatgaacgagtatgggtctgcatgcgtatcaggacagacaaa
acaactcctaatgatttcaatacatatagaaaggttatgcggagcattaaagacaacatc
acggaggaggatttgttgaaggaaattcatgagatcatacgcttgcctatgtatgctgat
aggataaggaatgatagtaaagcagcccaacatacgaattcaacacgacggaggtga
DBGET
integrated database retrieval system
