Cucurbita pepo subsp. pepo (vegetable marrow): 111803530
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Entry
111803530 CDS
T05351
Name
(RefSeq) ruvB-like 2
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111803530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111803530
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpep03037
]
111803530
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111803530
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111803530
Chromatin remodeling factors
SRCAP complex
111803530
INO80 complex
111803530
INO80 complex (yeast)
111803530
SWR1 complex
111803530
ASTRA complex
111803530
Cilium and associated proteins [BR:
cpep03037
]
Motile cilia and associated proteins
Dynein assembly factors
111803530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_16
AAA_25
ATPase
Mg_chelatase
Zeta_toxin
TsaE
AAA_7
nSTAND3
SLFN-g3_helicase
bpMoxR
TiaS_TCKD
CBFD_NFYB_HMF
AAA_17
AAA_18
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
111803530
NCBI-ProteinID:
XP_023543748
LinkDB
All DBs
Position
LG10:complement(2877238..2880223)
Genome browser
AA seq
465 aa
AA seq
DB search
MAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEPRAVSEGMVGQTAARKAAGVILQMIK
EGKIAGRAVLLAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSELFSLEMSKTEALMQAFR
KAIGVRIKEETEIIEGEVVEVQIDRPAVAGAASKTGKLTLKTTDMETVYDLGAKMIEALG
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITTIRGTNYKSPHGIPIDLLDRLLIISTQPYT
EDEIRKILDIRTQEEDVEMSEEAKRLLTTIGVETSLRYSIHLITAAALACQKRKGKVVEM
EDINRVYHLFLDVKRSTQYLMEYQNQYMFNELGDAEEDDSNAMNP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgaagctctcggagagccgcgacctaacgcgaattgagcgcattggggcg
cactcccacatccgcggcctaggtcttgattcctcccttgaaccacgggccgtctcggag
gggatggttggccaaaccgccgctcgtaaggccgctggagtcattcttcaaatgatcaaa
gaaggaaaaattgccggtcgggctgttctcctcgctggtcagccaggtactggcaagact
gctattgccatgggcatggctaagtctcttggccttgaaactcctttcgctatgattgcc
ggcagtgagctcttttcactggagatgtccaaaactgaagcattgatgcaggcctttcgt
aaagctatcggcgtacgaataaaggaagaaaccgagataattgaaggagaggtcgtcgag
gttcaaatagacaggccagcggttgccggggcagcgtcgaagaccgggaagcttactttg
aaaacgacggatatggagacggtatatgatttgggggcgaagatgatcgaagctttaggg
aaggaaaaggtgcagagcggcgatgtaattgcgattgataaggcatcagggaaaattact
aagctggggaggtctttctctcggtctagggattacgatgcaatgggtccacaaacgaag
tttgtgcaatgccccgatggtgagttgcaaaagcggaaggaggttgtacattgtgtcaca
ctccatgagatcgatgtcatcaatagcagaacacaaggtttcttagctctattcactggt
gatactggagaaattcgggctgaagtaagggaacaaattgataccaaagtggctgagtgg
agggaggaaggcaaggccgagatagttccaggtgttctctttattgatgaggttcatatg
cttgatattgagtgcttctctttccttaatcgtgctttggagaatgagatggctccaata
ctagttgttgctactaatagggggattaccaccatccggggaacaaactacaaatccccg
catggtattcctattgatcttcttgatcgcctacttataatttccactcagccatataca
gaggatgaaatacgaaagattttagatatcagaactcaagaggaagatgtggaaatgtct
gaagaggcaaagagacttttgaccacaattggtgtagaaacatcgctcagatattccatc
catttaatcacagcagctgcgttggcatgtcagaaacgaaaggggaaggttgtggagatg
gaggacataaatcgtgtctaccatctgttcttagatgtgaagagatcaactcagtacttg
atggagtaccaaaatcaatacatgttcaacgaattgggagatgctgaagaagatgattct
aatgccatgaacccttga
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