Cucurbita pepo subsp. pepo (vegetable marrow): 111803541
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Entry
111803541 CDS
T05351
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111803541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111803541
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111803541
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
111803541
NCBI-ProteinID:
XP_023543764
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Position
LG10:complement(4643770..4646970)
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AA seq
586 aa
AA seq
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MSSKRKKKGGSGDSDESTRGGSIFPDEVLERVLGLVKSRKDRSSVSLVCKDWFNAERWSR
THVFIGNCYSVSPEIVIRRFPNIRSVSLKGKPRFSDFNLVPPNWGADIHSWLVVFASKYP
NLEELRLKRMTVTDESLEFLGRSFPNFKALSMMSCDGFSTDGLAAIATHCKNLTELDILE
NDINDKSGNWLSCFPDTLKSLQVLNFASLNSDVSFESLEKLVKRCNSLKVLKVNRNINLE
QIQRLLVNAPQLTELGTGSFSQELTLRQYYDLEDAFKSCNNLHTLSGLLESTGLYLQVLF
PASANLTFLNLSYAILHGGELAGLLSHCPVLRRLWVLDTVEDKGLKAVGLSCPLLEELRV
FPADPYADNLVHGVTESGFLAVSYGCPKLHYVLYFCHQMTNEAVATIVQNCPDFTHFRLC
IMNPHQPDYLTKQPMDEAFGAVVKTCSKLRRLAISGLLTDITFEYIGKYAKKLETLSVAF
AGSSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACKVTMNGCRI
LAKQVPRLNVEVIKDGGSDECEAESVYVYRSVAGPRRDAPSFVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagaggaagaagaagggggggtcaggggactcggacgagtcgactcggggt
ggttccattttcccagatgaggtattggaaagggttctgggtttggttaagtctcgaaaa
gatagaagctctgtatctctggtttgtaaagattggttcaacgccgagcggtggtctcga
acccacgttttcatcgggaactgttactctgtttcaccggaaattgtaatccgacggttc
ccgaacattaggagtgtgtcgttgaaggggaaacctaggttttcggatttcaatttggtg
ccaccgaattggggagctgatattcattcatggcttgtcgtgttcgcttcaaaataccca
aatcttgaagagttgaggctgaaaagaatgactgtaactgacgagagcttggagtttttg
ggtcgttcgttccctaatttcaaagcgctttcaatgatgagctgcgatgggttcagcacc
gatgggcttgcggccattgccactcactgcaagaacttgacggagctggacatacttgag
aatgacatcaatgacaagagtggaaattggctgagttgcttcccagataccttgaaatct
ctgcaagtactcaactttgcaagtttgaacagcgacgtcagttttgagtcccttgagaag
ctggtgaaaaggtgcaattcattgaaggttttgaaggtcaataggaatataaacttagaa
caaatacagaggctgcttgttaatgctcctcagttaacagagttaggcaccggctctttc
tctcaagagctcactcttcggcagtactacgacctcgaagatgcctttaaaagttgcaac
aatcttcatactctctcgggcttgttggagtccacagggttgtatctccaagttcttttt
cctgcctctgccaacttaactttcttgaatctcagctacgccattctgcacggtggtgaa
cttgctggtcttctttcccactgccccgtcctccgccgcctttgggttttagacacagtt
gaagacaagggcctgaaggctgttggactcagctgccccttgctagaggaactgcgtgta
tttccagcagatccgtatgctgacaatttagttcatggggtaacagagtctgggtttctt
gctgtctcttatggctgccctaaactccattacgttctctacttttgtcatcagatgaca
aacgaggctgtagccaccattgtgcagaactgcccagatttcacccattttcgtctctgt
attatgaacccccaccaacctgactatcttacaaagcaaccaatggacgaggcctttggt
gcggtggtgaaaacatgctctaagctacgtagactagccatttcgggtttgctaacagac
ataacatttgaatacatagggaaatatgcaaaaaaattggaaactctttcagtggctttt
gctggaagcagcgactggggaatgcagtgtgttatgagtggttgtccaaagctgagaaaa
ctggaaatcagagacagtccatttggaaatgctgctttgctttctggtttggaaaggtat
gaatccatgagatctctatggatgtcggcctgtaaggtgacgatgaatgggtgtcgaatt
ttggcgaagcaggtgccgaggttgaacgttgaggttattaaggatggtgggagtgatgaa
tgtgaggctgaaagtgtttatgtataccgctccgttgcaggtccgagaagagatgccccg
tctttcgttctcaccctctaa
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