KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111803563
Entry
111803563         CDS       T05351                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111803563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111803563
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111803563
 Complex B
    111803563
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 111803563
NCBI-ProteinID: XP_023543801
LinkDB
Position
LG10:1579419..1582768
AA seq 314 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE
QAANALQNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRRLFGRSRRRRSRSQSQSRSPHRHHGHDDRPHGGRGRGPSRRDGDKDPRYHDRSRRPRS
RSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDRETADNGSGHQDVKDDGGSNG
LVQNEDEFDPSKQY
NT seq 945 nt   +upstreamnt  +downstreamnt
atggcggaacatttggcttcaattttcggaacggaaaaggatagggttaactgccccttc
tacttcaagattggagcctgtagacacggagatcggtgctctcggcttcacaccaagccc
agcatcagccctacacttctcctctctaatatgtatcagagacctgacatgatcaccccc
ggtgttgaccctcagggccaagcccttgatccgcgcaaggttcaagatcacttcgaggac
ttttatgaagatctattcgaggagctgagcaaatatggagatctcgaaagcttaaatatt
tgtgataatttggctgaccatatggtgggcaatgtctatgttcagtttagggaagaagaa
caagctgcaaatgcgcttcagaatcttaatgggcgcttttatgcaggtcgacccatcatt
gttgacttctctcctgtgacggattttcgagaagctacttgcaggcaatatgaggaaaat
gtatgtaatcgtggtggctattgcaactttatgcatctgaagaagataagcagagagttg
agaaggcgtttatttgggaggagcagacgcaggcgtagccgaagccaaagtcaaagtcga
agcccccacaggcatcatggacatgatgaccgtccccatggtggtcgtggacgtggacct
agtagaagagatggagacaaggaccctcggtatcatgatagaagcaggaggcctagaagc
cgtagccctaggcatagagggggacggagtaggagccctggagggaggaggaatagaagt
ccggtgagggaaagtagtgctgaaagaagggctaagattgaacagtggaacagggacagg
gaaacggcagataatggtagtggtcaccaggatgtcaaggatgatggtggtagcaatggc
cttgtacaaaatgaagatgaatttgatccttctaagcagtactag

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