Cucurbita pepo subsp. pepo (vegetable marrow): 111803640
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Entry
111803640 CDS
T05351
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111803640
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
General mRNP proteins
111803640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111803640
NCBI-ProteinID:
XP_023543913
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Position
LG10:complement(2127101..2134522)
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AA seq
598 aa
AA seq
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MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS
KSEHDNGKDDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSTEKERDRDRDREE
RDRERHKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKERERREREK
REREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPL
KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQP
VMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELV
QLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVAKS
NDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPLNGQ
AAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVEEECSKYGH
VKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtatgattacttggagaaagccgtggaggatcaggacgataaggag
acgaagaaggcaaagaagagcgagagtgagaggaatgagaaaagcagcagaaagagagag
gtagacgaggaagctggctctggtggtcgtgtggacgaggagctgaaggtcaagaggtcg
aaaagcgagcatgacaatgggaaggatgatagggatcactcgggccgagcgagggatcgg
catcgaagagacagagaggaagaaacagatggggttaaagagagggatagggaaaggaac
cgtacgagagataggggtagcactgagaaggaaagggatagagacagggatagagaggag
agagatagagagagacataaggagaaggagaaggagagggagagagacaaggatagaagg
gataaggagagagatagagagaggcataaggagaaggacagagagagagataaggataga
agggacaaggagagggagagggagaaggagaaagaaagagaaaggagagaaagggagaag
agggagcgggagagagaagaggagagatcgaggcgaagcaggagtcggtctgttcgggag
aaagaacgtgaagttgatgtcagagaaaacaggagaatgaaggaaaagaaagacatggtg
gagcctgaagcggatccagagagggatcaaagaactgtatttgcatatcagatgcctttg
aaggccacagagagagatgtttatgaattcttttcaaaagcgggaaaggtgagagatgtc
cggctgatcatggacaggaattctagacggtcaaaaggagttgggtatgttgaattttat
gatgcgatgtctgtgcccatggctattgctctctctggtcaactactttttgggcaacct
gttatggttaaaccttcagaggctgaaaagaatcttgttcaatcaaatacgtctggggcc
tctggtgcaggtccatatggagcagtagacaggaaattatatgttggtaatctacatttt
aacatgactgagactcaccttcgagagatttttgaagcttttggtcccgtggagcttgtg
caactacctctcgaccttgaatcaggtcactgcaagggttttggatttgttcaatttgct
catctagagcatgcgaaggcagctcaaagcttgaatgggaaattagaaattgcaggccga
accattaaggtttcatctgtaacagatcacattggagcacaagagaacgttgcaaaatca
aatgaccttgatgatgatgaagggggcggtctggcattgaatgctcaatcaagagctctg
cttatgcagaagcttgaccgcactggcattgctaccagtattgcaggatctcttggagct
ccagtgttgaatgcgtcagccccaaatcagagagctaccagcttgccactaaatggtcaa
gctgcagttgctgcaccagtacttccagcgaattttactccacctgttttacaatctgtt
ggaagtcctagtgaatgcctactactgaaaaacatgtttgatccatcgacggagacagca
ccagactttgacttggaaatcaaagaagatgttgaagaggagtgttctaaatatggtcat
gttaagcatatatatgtggataaaaatagcgcgggatgtgtgtatctgcaatatgatacg
gtggaagctgctattaatgctcaacgtgcaatgcacttgagatggtttgcaggcaggcag
atatcagtcttgttcatgcaaccgcaggtgtatgaagccaagtttataggagcttga
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