Cucurbita pepo subsp. pepo (vegetable marrow): 111803648
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Entry
111803648 CDS
T05351
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111803648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111803648
03009 Ribosome biogenesis [BR:
cpep03009
]
111803648
04131 Membrane trafficking [BR:
cpep04131
]
111803648
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111803648
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111803648
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111803648
Membrane trafficking [BR:
cpep04131
]
SNARE
SNARE associated proteins
Others
111803648
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111803648
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111803648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
AAA_17
Parvo_NS1
Viral_helicase1
IstB_IS21
ABC_tran
NACHT
AAA_7
Vps4_C
AAA_24
NB-ARC
AAA_lid_PRS2_C
TsaE
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
111803648
NCBI-ProteinID:
XP_023543926
LinkDB
All DBs
Position
LG10:complement(1359955..1365778)
Genome browser
AA seq
805 aa
AA seq
DB search
MANQAESSDSKGAKRDFSTAILERKKAANRLVVDEATNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
NTSGTAAADPFATSAGGADDDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaagctgaatcctccgattctaagggtgccaagagggattttagtaccgcg
attctagagcgtaagaaagccgcgaaccggcttgttgtcgatgaggccaccaatgatgac
aactcggtggttgcgcttcaccctgacactatggagaagcttcaactcttccgtggcgac
acgatcttgattaaggggaagaaaaggaaggatacaatctgcattgctcttgctgatgac
acttgtgatgagccaaaaataagaatgaacaaggttgtgcgaagcaaccttcgtgtcagg
cttggagatgttgtttctgtgcatcaatgtgctgatgttaaatatggaaagcgggtacac
attcttccagtcgacgacactattgaaggtgtcaccgggaatctttttgatgcatacttg
aaaccttacttcttggaggcctatcgtccagtgaggaagggtgatctcttccttgtgagg
ggaggaatgagaagtgtcgagttcaaggtcattgaaactgatcctcctgaatattgtgtg
gttgccccggacactgaaatcttctgtgatggggaacctgtgaaaagagaggatgaagat
agattagacgaggttggttatgatgacgttggtggtgttagaaaacaaatggcacaaatt
cgtgaattggtggaacttcctctgagacacccacagctttttaaatccattggagtaaag
ccaccaaagggaattctgctttatggacctcctggatctggaaagactttgattgccaga
gctgtagctaatgaaactggggctttctttttctgtatcaatggaccagaaattatgtcg
aagttagctggagagagtgaaagtaaccttagaaaagcttttgaggaggcagaaaagaat
gctccatctattatctttattgatgagattgattcaattgctcctaagcgagaaaaaact
catggagaagttgagagaaggattgtttctcaactcttgacactaatggatgggttaaaa
tctcgtgctcatgtcattgttattggagctacaaatcgtccgaacagcattgatccagct
ttgagacgatttggaaggtttgacagggaaatagatattggggttcctgatgaagttggg
cgtcttgaggttcttcgcatccatactaagaacatgaagcttgctgaagatgttgactta
gaaagaatttccaaagatacacatgggtatgttggagctgacttggcagcactttgcacc
gaggctgcacttcaatgcattagagagaaaatggatgttattgatttggaagacgaatca
attgatgctgagattcttaactcaatggcagtcacaaatgagcacttccacaccgccctt
ggaactagtaatccatctgctctacgtgaaactgttgtcgaagtgcctaatgtcagctgg
gaagacattggaggtcttgagaatgtcaaaagggaacttcaagagaccgtacaatatcca
gtggaacatccggagaagttcgagaaatttggcatgtcaccctcaaagggagttcttttt
tatggccctcctggatgtggaaaaactcttctggccaaagctattgcaaatgagtgccag
gctaacttcataagtgtaaagggtcctgaattgcttacaatgtggtttggagaaagtgag
gccaatgttcgtgaaattttcgataaggcgcgccagtctgcaccttgtgttctgttcttt
gatgagcttgactctattgccactcagagaggcagcagcgtgggagatgctggaggtgct
gctgatcgagttctaaaccaacttctgacggaaatggacggaatgtccgcaaagaaaact
gtcttcattattggggcgaccaacagaccagatattatagatcctgcacttcttcgtccg
ggacgtctcgatcaattgatttacattcctcttcccgacgaagattctcgtcaccaaatt
ttcaaagcttgcttgaggaagtcgccgatctcgaaagatgtagaccttagagcccttgct
aagtacactcaaggttttagtggtgctgatattacagaaatctgtcagcgtgcttgcaaa
tatgctatcagagagaatattgagaaagatattgagagggagaggaggagaagagataat
cctgaggctatggaagaggatgtagaggacgaggtggcagagattaaagctgctcatttc
gaggagtcaatgaagtttgctcgtagaagtgtgagcgacgccgatattcgcaaataccag
gcatttgctcaaacactgcagcagtcgagagggtttggttctgaattcaggttctcagaa
aacacgtctggaactgcagccgccgacccgtttgcaacatcagctggcggggctgatgat
gatgatctttacaactag
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