Cucurbita pepo subsp. pepo (vegetable marrow): 111803723
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Entry
111803723 CDS
T05351
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111803723
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111803723
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Dioxygenase_C
Motif
Other DBs
NCBI-GeneID:
111803723
NCBI-ProteinID:
XP_023544015
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Position
LG10:4434707..4437798
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AA seq
596 aa
AA seq
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MGKKKKLRLQNQGSHVILDNGLLMVTISNPQGYVSGIKYGNMDNLLDVKSSESKRGYWDI
NWSWPGGKDRYQLLKGSEFNVINATDDTIEISFRKASKLSSRYIMRTGMPGFYCYAIYEH
PSACRAFDLVQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLHPGRGEELIVPESVLLVN
PINPDLKGEVDDKYQYSVDNKDGGVHGWISSSPNNIGFWVVFPSHEFRNGGPTKQNLTVH
TGPTCLAMFHGTHYIGEDILTHIKEGEAWRKVFGPVLVYLNSTSDVSEAHNLWIDAKEQE
NERGSISGRLLVQDRFISSSPIPARDAHVGLSAAREEGGWQIESKEYQFWVQTDSNGDFT
IRNVIPGVYGLHGWVPGFIGDYLHQSLVTVSAGSHTHLGILTYSPLRDGPTVWEIGFPDR
TAGSFYVPDVNPMFRQYGLWEGYSDLHPINDQVFTVGINDPKKDWFYAQVCRRGEDGKFV
ATTWSIKFNMTSLTEGTYRLRLAIASATRSDLKINVNSMGSESSLVFQLMNLGMDNTVCR
HGNHGLYRNYSVEVPSSMLIKGDNNIFLTQARGGDELCGLLYDYLRLEAPDDTPSS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaagaagctgaggctgcaaaaccaaggctcccatgttatattggacaat
ggattgttgatggtgaccatatccaacccccaaggttatgttagtggcatcaagtatgga
aacatggacaatctgctagatgtcaaatccagcgaatctaaaagaggatattgggatatc
aactggagttggcctggaggcaaggacagataccaattgcttaagggatctgagtttaat
gtcatcaacgcaactgacgacacgatcgagatatcgttcaggaaagcttctaagttgtcc
tctaggtacataatgaggactggtatgccaggcttctactgctatgcaatctacgagcac
ccatcggcatgtcgggctttcgatcttgttcagacaagaatggtgtttaaactacgacaa
gaaaagttccactacatggcaatttcagatgagaagcaaagaataatgccaatgccggaa
gatttgcatccaggcagaggtgaagaactaattgtaccagagtcagttctgcttgtaaat
cccattaatcctgatctgaaaggagaggtagatgataagtatcaatactcagtggataac
aaagatggtggagttcatggatggattagttccagcccaaacaacataggtttctgggta
gtttttccaagccatgagttccgaaatggcggtccaacgaagcaaaatctcacagttcat
accggtcctacatgtcttgctatgtttcatggaacacattacattggagaagatatactt
acgcatattaaggaaggagaggcatggaggaaggtgtttggtcctgttcttgtatacctt
aactccacctcagatgtatcagaggcacacaatttatggatagatgcaaaagaacaggaa
aatgaacgtggttccatttcaggaagactgttagtccaagacaggtttatttcaagttcc
cccatccctgcaagagatgcacatgttggtttatctgctgctagagaagaaggtggctgg
caaatagagagcaaggaatatcaattttgggtacaaacagattccaatggagatttcact
atcagaaacgttattccaggagtctatggacttcacggttgggttcctggattcattggt
gattatcttcaccaatcactagtaacagtatctgcaggatctcatacccatcttggcatt
ctgacctatagtcccctcagagatggtcctactgtttgggagattggttttcctgaccga
acagctggtagcttctatgttcctgatgtgaatccgatgttcaggcaatatggtttatgg
gagggatacagtgatttacatccaataaatgaccaagttttcactgtgggtatcaatgat
ccgaagaaagattggttctatgctcaagtttgcagaagaggggaagatggtaagtttgtt
gcgacaacatggagtattaagttcaacatgacatcattaaccgaaggaacttacaggctg
aggttggcgattgcatccgccacacgctcggacttaaagatcaatgtcaactcaatgggg
tcggagtcgtcactggttttccagctgatgaatctgggaatggataacacagtttgccga
catggaaatcatggactgtatcgaaactatagtgttgaggttccatcatcaatgcttatt
aagggagataacaacatatttctgacgcaggcaagaggtggagatgaactctgtgggctt
ttatacgattatttaagactggaagcacctgatgatactccatcaagttga
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