Cucurbita pepo subsp. pepo (vegetable marrow): 111803822
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Entry
111803822 CDS
T05351
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111803822
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
111803822
Transfer RNA biogenesis [BR:
cpep03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
111803822
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
111803822
NCBI-ProteinID:
XP_023544170
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Position
LG10:complement(5014075..5023155)
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AA seq
795 aa
AA seq
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MAFRAVNSCSVFRSASSPPLSAFRCCHFNPRNLQFRWSSKLNCRSPVLWHKHRVSRSGGG
RFYYLYSIVESVVEELEALSRRKKVFATAKMGMVGMSSDDGTEDKLMNRTLEKGRLLEFK
KDSERVLLAVAQRPDGKKNWMVFDQNGVTSSIKPQQVTYIVPGVENFEQTEIADFIKKAE
DNLDPSLLEFAWLELLEQNKAVTTEELAEMIFGSTEPLDSYCAHLLLSRDELYFTVLQTK
GSRSFYGPRPTDQVEELQRKKLAKEAAEKELQEFVELLKSAKAMPSKSKPPKSSWAAEEK
TRHKIESLESYAIDACKDDEQRKTAGMILKAMGLVRTTSSAVNLLIDIGYFPRHVNLDLQ
KFNIRTYHSDEIIAAAESLLLGASDPDEVDRKNLTHLKVYAIDVDEADELDDALSATRLS
DGRIKIWIHVADPARFVQPGSIVDREAMDRGTSIFLPTATYPMFPEKLAMNGMSLKQGEI
CNAVTVSVVLHSDGSIAEYSVENSIIKPTYMLTYESASELLSLNLEEEAELKVLSEAATL
RLAWRRQQGAIDMPSLETRIKVANPEDLDPEINLYVENQDNPAMRLVSEMMILCGEVIAT
FGSRNNIPLPYRGQPQTNIDVSAFAHLPEGPVRSSAIVRTMRAAEIDFSKPIRHGILGIS
GYVQFTSPIRRYLDLVAHYQVKAFLRGDSPPYSHGQLEGIASTVNINIKLAKRLSSLSHR
YWVLEYLRRQPKENRYRALILRFIKDRIAALLLVEVGLQASAWVSLGAEIGDEVQVRVVD
AHPRDDVLSLKEIIQ
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcgagctgttaacagttgctcagtcttccgctctgcttcgtccccgcctctc
tctgccttccgatgctgccacttcaatcccaggaatcttcagtttcgatggagctcgaaa
ttaaactgtaggtctcctgtattatggcataaacaccgagtttctaggagtggtggaggt
cgattctactacttgtacagtattgttgaaagcgttgtcgaagagctcgaagctctgagc
cggcgaaagaaagtttttgctaccgctaaaatgggaatggtgggcatgagcagtgatgat
ggtactgaagataagcttatgaaccgaacattggaaaagggacggctgctggagttcaag
aaggactcggagagagtattactggcagttgctcagagacctgatgggaaaaaaaactgg
atggtgttcgatcagaatggtgtcacttcatctattaagccacaacaagttacatacatt
gttccaggtgttgaaaatttcgagcagacagaaattgcagacttcattaaaaaagctgag
gataacttggacccgtcactgctggagtttgcatggcttgagcttcttgaacaaaataag
gcagtgactaccgaagaattagctgagatgatatttgggagtacagaacctcttgatagc
tactgtgcacatctattgttatcaagagatgaattatacttcactgttctgcagacaaaa
ggttcgcgatctttttatggtccaagacctactgaccaagttgaagaacttcaacgtaaa
aagcttgcaaaggaggcggctgagaaagaactacaagagtttgtagaattattgaaatct
gcgaaggcaatgccttcgaagtccaaaccacctaaatcatcctgggcagctgaagagaaa
accagacacaagattgagtcacttgaatcttatgctattgatgcttgcaaggatgatgaa
cagaggaaaacagctgggatgattctcaaggctatgggactggtgagaacaacatcatca
gcagtaaatcttctcatagatatagggtatttccctcggcatgttaatcttgatcttcag
aagttcaacattcggacatatcattcagatgagattatagcagctgcggaatcactttta
ctgggggcatctgatcccgatgaggttgacaggaagaatctcacacatcttaaggtttat
gccattgatgttgatgaagcggatgagcttgatgatgcattgagtgcaacaagattgtca
gatggtcgaattaaaatatggattcatgttgctgatccagctagatttgttcaaccaggg
agcatagtagacagggaggccatggacagaggaacttctatatttcttcctacagccaca
taccctatgtttccagagaaactagcaatgaatggaatgagtttaaaacagggagaaatt
tgcaatgcagttactgtatctgttgtccttcattctgatggaagcattgcagaatactct
gtggaaaactcaatcatcaaaccaacttacatgctgacatatgaaagtgcgtcggagctg
cttagtttgaacttggaagaggaggctgaacttaaagttctatctgaggctgcaactttg
cgattagcatggcgaaggcaacagggtgcaatcgacatgccttctttggagacacggatc
aaggtagcaaatccagaagacctggatcctgaaatcaatctctacgtagaaaaccaagat
aaccctgccatgcgacttgtttcagagatgatgatcctatgtggagaagttatagccact
tttggttctcgcaataacattccgttaccctacagaggacaacctcaaacaaatattgat
gtatctgcatttgcacatcttccagaaggacctgttaggagctctgcaatagttagaaca
atgcgtgctgctgaaattgacttcagtaagcctatacgccatgggattttgggaatttct
ggttatgtccaatttacatctcccatccgtaggtatttggacctcgttgcacattaccag
gttaaggcattccttagaggcgactctcctccgtattcccatggtcaattggaagggata
gcatctactgtaaatataaatattaaattggcaaagagactctcaagcctcagtcatcgt
tattgggtattagagtacttgagacggcaaccaaaagaaaacagatatcgagcgttgatt
cttaggttcattaaagatcgaattgcagccctgctgttggttgaggtggggcttcaagca
tctgcatgggtttctcttggagcagaaattggagatgaagtacaagttcgagtggtggat
gcccatccacgtgatgatgttctttctctgaaggagatcattcagtag
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