Cucurbita pepo subsp. pepo (vegetable marrow): 111803957
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Entry
111803957 CDS
T05351
Name
(RefSeq) PHD finger protein At1g33420-like
KO
K26271
PHD finger protein MS1/MMD1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111803957
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111803957
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
111803957
NCBI-ProteinID:
XP_023544348
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Position
LG10:complement(9229223..9233882)
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AA seq
704 aa
AA seq
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MVVNARPHKRMKRRVTADLFDFLSFPSSSSMSAAGAAHDSDHDHDHLFTGPFRNNVRTFL
SNHALLPSPSSLFPHLLTWQILFRVGDLGLHGPDSQPALVYLDIVEEDVARSRSLYCDQC
RVVGWSAHPVCAKRYHFIIKANGSSIGGYHKPCMCCGDVLHLSESKCKSCNHITSADDVE
DWVYQQLENNTHLLHAVVHSNGYGHLLRVNGREGGSSHLSGCHIMNFWDRFCKMLGVRKV
SVMDVSKKYGVGYRLLHAVTKGHPWYGDWGYEFGAGSFAVTPDAYKMAVETLSTLPLSIF
TSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFRFLMSLIHNVRKSSTSITDVTDEKQPS
RVLCSWTRSDITRVEEAMLKVLHAVSGSNWVTWRTLRGAVCKAGPPELLDYCLKNLGGKI
SSDGMVVNAQRNPQSGAFEYRLEPGRVSLNTATDCTESSISSYPSEENLLLDLRFLYNAM
LHPHSMVNYGPQPRRAAAVSSAVKLIDCKQFVKDYKPEKLSTKLNPFSICLLCEVEVVDD
SKDNSSRPPPELVVLPSNATMSDLKLEASKAFQDVYLMFRRFQVEEIVDHGGVDDSTQVK
LLFGQTESVRVRGRCQVKITLNRFRMERGVERWTVECSCGAKDDDGERMLACDLCGVWQH
TRCSGIRDSDTVPGKFVCYKCRSSIVAMNTNGETEADTVRSWLC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttaacgcccgtccccacaagagaatgaagagacgtgtcacggctgatctcttc
gacttcctctccttcccttcttcttcctccatgtccgccgccggcgccgcccatgattcc
gaccacgaccacgaccatctcttcaccggccccttccggaacaacgtccgcaccttcctc
tccaaccacgccctcctcccctcgccctcttccttgttccctcaccttctcacctggcag
atcctcttccgcgtcggcgacctcggcctccacggccccgactctcaacctgcccttgtt
tatctcgatatcgtcgaggaagacgtcgccagatccagatccctctactgcgaccagtgc
cgtgttgttgggtggagtgcacatcctgtgtgcgccaaacggtaccatttcataataaag
gctaatggaagctccattggaggttatcataagccatgtatgtgctgtggagacgtcttg
catctctccgagtccaaatgcaagtcgtgcaaccatataacgagtgcagatgatgtagaa
gattgggtgtaccagcagttggagaacaatacccatctcttacatgctgtggttcactcc
aatggttatgggcacctactcagggtcaatggaagagagggtggctcaagccacttatct
ggatgccatatcatgaatttttgggatcgattttgtaaaatgcttggagtaagaaaggtg
agcgtgatggatgtgtccaagaagtatggggttgggtaccggctgcttcatgccgtcacc
aaaggtcatccgtggtatggcgattggggttatgaatttggtgctggtagttttgctgtc
actcccgatgcttacaaaatggctgttgaaaccctctccacccttcctttgtcaatcttt
acatctcaaggacgtaagccccgttctcatctgcaggacataattttgtattatcagtct
ttgtcagagcgcaaacttgtaaacgtaagagatctctttaggtttctgatgagcttgatt
cataatgttcgcaagtcatcaacatccattactgatgtaacggatgagaagcagccatca
agggtcttgtgctcgtggacaagaagcgacattacacgtgtcgaagaagcaatgctgaaa
gtgctgcatgctgtatctgggtcgaattgggtcacttggcgcacccttcgtggtgctgtg
tgcaaagcaggtccacctgaactgcttgattattgccttaagaatcttggtggaaaaata
tcatctgatgggatggttgtcaatgctcaacgcaatcctcaatcaggtgctttcgaatac
aggctcgaacccggccgtgtttcattgaatactgctactgattgtactgaatcatccatc
tctagctacccatctgaagagaatcttctgttggacttgaggtttttgtacaatgccatg
cttcatccacattctatggtgaactatgggccccagccaagaagggcagcagcagtgagc
tccgctgtgaagctcatagactgcaagcagtttgtaaaagattataagcccgagaagctg
tcgactaagttgaatcctttttcgatatgtctcttgtgcgaggtcgaagtcgtggacgac
tcaaaagacaattcctcaaggccccctccagagctagttgtacttccatctaatgctacc
atgtctgacctgaagctagaagcatcaaaagctttccaagatgtatatttgatgttcaga
aggtttcaagtagaagagatagtcgaccatgggggtgtagatgattccacccaggtcaag
ctgctgttcggacaaaccgagtcggtgcgtgtcagaggaagatgccaagtgaagatcacg
ctgaacaggtttcgaatggagaggggggtagaaaggtggacagttgaatgtagttgtgga
gccaaggacgacgacggggagagaatgctagcctgcgacttgtgtggggtttggcaacat
acaagatgctcggggattcgagactccgacacggtcccagggaaatttgtatgttataaa
tgcagaagctccattgttgcaatgaataccaatggggaaacggaggccgataccgtgcgg
agttggttatgttag
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