Cucurbita pepo subsp. pepo (vegetable marrow): 111804139
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Entry
111804139 CDS
T05351
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111804139
03015 mRNA surveillance pathway
111804139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111804139
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111804139
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF6432
Borrelia_P83
G-gamma
Motif
Other DBs
NCBI-GeneID:
111804139
NCBI-ProteinID:
XP_023544608
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Position
LG01:complement(9622309..9631732)
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AA seq
644 aa
AA seq
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MSPVKLTLRCPSRVGQVTADPQPDFSFDDLRVELYSLEEKLKTSTTPFTKTCSRDFPLIK
TTKRSSKPFVMGVYEDELQNIFNDGEVVCDQGSNAKRFNCDGCFLSDSEDSDNESTLETR
AHLMEDVDLVESSLAQLTDDHLLNTKEEIRNQLGRLETNLTTLNEKSSAAASQIEKYYEA
RREADRRLDTQYQREIAEGLDKYLTTVQRHHEQISQREERKIRSDAAFEEAKRKEKAMLE
EKKRLEKAKAEAEAKAKAEEAMKAAIEAESRAMKEVAEREAAENLKKVDAVQAQETIVGA
PTTKPVNSVGQPKGTALDGTNVSRSPGTMVRASRNALTLEQERLQKLKEVEEGNQALRLS
SNKDFSTHERHIARLIRQIVGTKENVSTKTSQLLKIFMDPLCPQTISIAAFAKKVVSQCE
SSENAVFACSHVIVLVTSQVPSAMVLLLAEFHRACIYTVPKHVGYSEAAFESKESYYKTL
GFREDVDGKMESVKDYLKRLEAYMKLYGALVQTEVPGARNIHGLEEGWAWLARFLNAVPP
NIYTATALYAFLQVAGFALFRKYKSQFRKLLNIISDNFLSALRGKENPGLKQIIVQIESY
LEDRKFLQEPEGRTLRGSLLSSGMVPESEYTKDSYSRSGNSYFY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggtgaagttgacccttcgctgcccttctagggtaggacaagttacagctgat
ccacagcctgattttagctttgatgatttgcgagtggaactttattctttggaggagaag
ctaaagacgtccacaactcctttcacaaaaacatgttcacgagactttccactcataaaa
actacgaagagaagctccaagccttttgtaatgggtgtgtacgaggatgagctacagaac
atatttaacgatggtgaagtagtttgtgaccaaggttcaaatgctaagcgctttaattgt
gatggatgttttctcagcgatagcgaagattctgacaatgaatcaactcttgaaacacga
gcccatctgatggaggatgtggatttagtggaaagttctttagctcagctaacagatgat
catctgcttaacacgaaggaggaaatcaggaaccaacttggaaggttggagaccaacctc
actactttaaatgaaaagtccagtgctgcagcctctcaaattgagaaatactatgaggca
agacgagaagctgaccggagactcgatactcaatatcaacgcgagattgctgaaggcctt
gataagtacttgactactgttcagcgtcaccacgaacaaatatcacaaagagaagaaaga
aaaataagaagtgatgcggcttttgaggaagccaaaagaaaggagaaggccatgctagaa
gaaaaaaaacgtctagaaaaggctaaagcagaagctgaggcaaaagctaaagctgaggag
gcaatgaaagctgctatagaagctgagagtagggcaatgaaagaagtagctgaaagggaa
gccgctgaaaacttaaaaaaggttgatgctgtacaagcgcaagaaactattgttggggca
ccaaccaccaaaccagtaaactcagtcggacaacctaaaggaactgctctggatggaaca
aatgtgtcaagatcaccaggtaccatggttagagcctcaagaaatgctttgactttagag
caggagagactacaaaaacttaaggaggtagaggagggaaaccaagcattgagattgagt
tcaaataaggattttagcacccatgaaagacatattgctagactaattagacaaatagtg
gggacaaaagagaatgtcagtacaaaaaccagtcaacttctcaagattttcatggatcct
ctttgtccacaaactattagcattgcagcatttgcgaagaaggtcgtttctcaatgtgaa
agttcagaaaatgcagtttttgcatgcagtcatgtcattgttctcgttacctcacaggtc
ccaagtgctatggttcttcttctagcagagttccatagagcttgcatctacacagttccg
aagcacgtaggatactcagaggccgcatttgaatccaaagagtcatattacaaaactctt
ggattccgagaggatgtagatggaaaaatggagagtgttaaggattatttgaagcggcta
gaagcatacatgaaactgtatggggcattggttcagacagaagttcctggtgcccgtaac
atacatggtcttgaggaaggttgggcatggctcgcaagatttctaaatgcagttcccccc
aatatatacactgcaaccgcgctctatgcattcttacaagtagcaggctttgcactgttc
agaaaatataaatctcagttcaggaagcttctgaacatcatctccgacaacttcttgagt
gcactaagaggaaaggagaacccagggttgaaacagataatcgtgcagattgaatcctat
ttggaagacaggaaattccttcaagaaccagaaggaaggaccttgcggggttccttgttg
tccagtggtatggtgccggagtcagagtacacaaaagattcatacagccgttcaggtaat
tcatatttctactga
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