Cucurbita pepo subsp. pepo (vegetable marrow): 111804179
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Entry
111804179 CDS
T05351
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111804179
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111804179
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111804179
Protein phosphatases and associated proteins [BR:
cpep01009
]
HAD phosphatases
Fcp/Scp phosphatases
111804179
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111804179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
111804179
NCBI-ProteinID:
XP_023544663
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Position
LG10:4752338..4758370
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AA seq
794 aa
AA seq
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MYKSVVYQGDELLGEVEIYPEEKNGYKNIEVKEIRISHFSQPSERCPPLAVLHTIAASGI
CFKMESKTSQSQDMPLHLLHSSCIMENKTAIMVFGMEELHLVAMYSRDHDKQYPCFWGFN
VAMGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIEALQRKISSEVDPQRTAGM
LAEVERYQDDKLILKQYAENDQVIENGKVIKCQSEVVPALSDNHQPFVRPLIRLHEKNII
LTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFDVYVCTMAERDYALEMWRLLDPDS
NLINPKELLDRIVCVKSGSRKSLFNVFQDGFCHPKMALVIDDRLKVWDEKDQPRVHVVPA
FAPYYAPNAEGNNVVPVLCVARNVACYVRGGFFREFDEVLLQKIYNISYEDDANDIPSPP
DVSNYLGSEDEYSVSNGNKDTLTFDGMSDMEVDRRMKDALLASSTVNSADPRVPSLQYTM
ASASGTVPVPPYYPNMPLPHVDSVAHVAASEPSLQSSPAREEGEVPESELDPDTRRRLLI
LQHGQDTRERQSSEPAFLGRPPPLPQVVGPRAQPRGSWSPMEEEMSPLQLSWTRKEFPVD
EEPIREKHRSNHPSFFPKNDSSFPPDRIPHENQRLSKEAFYRDDRVRVSRRPSSYPAFSA
DEIPMNQSSSRSRENDIESGRSIWSETPVGALQEIAMNFGTKVEFKPALVSSTDLQFAVE
AWFVGEKIGEGIGKTRREAQRHAAEGSIKNLANVYVSRCKTDSTSANDMNKFPNDNGSGK
RMRTDFHGNLPKPK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtttaccaaggggatgagctactgggagaggtagagatttaccca
gaagaaaagaatggctacaagaacatcgaagtgaaggaaatcagaataagtcacttctcg
caaccgagtgagaggtgcccaccacttgcagtgcttcataccattgcagcctctggaatt
tgcttcaaaatggagtcaaagacctcgcagtcacaggacatgccgctccatcttttgcac
tcctcgtgtatcatggagaataagactgctataatggtgtttggaatggaggagctacat
ttggtagccatgtattctagagatcatgacaagcagtatccatgtttctggggcttcaat
gttgcaatgggactctacaattcatgtcttgtcatgctgaatcttagatgtcttggcatt
gtatttgatcttgatgagacacttgtggttgcaaatacaatgcgctcgtttgaggataaa
attgaagccctgcagcgaaaaataagcagtgaggtagatccacagcgtactgcgggcatg
ctggcagaggttgagcgatatcaagatgacaagttaattctaaagcaatatgctgaaaat
gaccaggttatagaaaatggaaaagtgattaaatgtcaatcggaggttgttcctgcattg
tctgacaatcaccaaccttttgttcgaccactcatacgattgcatgaaaaaaatatcatt
ttgactcgcatcaacccccagattcgtgatacaagtgttcttgtgagattgagacctgca
tgggaagatcttcggagctacttgactgcaagaggtcgcaagcgttttgatgtctatgtg
tgtacaatggctgaaagggattatgctttggagatgtggaggcttcttgatccagattca
aatttgataaatcccaaggaattgctggatcgcattgtttgtgtcaagtctggttctagg
aagtcattgttcaatgtcttccaagatggcttttgccaccccaagatggctctggtaatt
gatgatcgtttgaaagtgtgggatgaaaaggatcaacctcgagttcacgttgttcctgca
tttgctccttactatgcccctaatgccgaaggaaataatgtcgtccctgttctatgcgta
gcaaggaacgttgcctgctatgttagaggtggttttttcagggagtttgatgaggtcctt
ctgcaaaaaatttataatatttcttatgaagatgatgccaatgatattccctctccacct
gatgttagcaactatctcggctcagaggacgaatattcggtctctaatggaaacaaagat
acactaacttttgatggtatgtcagacatggaagtcgatagaagaatgaaggatgcactt
ttggcttcttcaactgtcaacagtgcagatccacgagtgccttctcttcaatatacaatg
gcttctgcttctggcactgttccagttccgccatattatcctaacatgccacttccccat
gttgattcagtggctcacgtggccgcctctgaaccaagtttacaaagctctcctgctaga
gaggagggtgaggtaccagaatcagaattggatcctgatacaaggcgtagacttcttata
ttgcaacatggacaagatacaagagagcgtcaatcaagtgaacctgcattcttagggagg
cctcctccattaccgcaggttgttggtccacgtgcacaaccacgtggaagttggtctcca
atggaagaagaaatgagcccattacaactaagttggacacgcaaagagttccctgtagat
gaagaaccgatcagagagaagcataggtctaatcatccttcattttttcccaagaatgac
agttcctttccacctgatagaattcctcatgaaaatcagagattgtcaaaagaggctttt
tatagagatgatcgtgtgagagtaagtcgaaggccatctagttatcctgctttttcagct
gatgagattccaatgaatcaatcatcttcaagaagtcgagagaatgacattgaatctgga
cgctccatctggagtgaaactcctgttggagctctacaggaaattgcaatgaactttggc
accaaggtggaattcaagccggcattagtctccagcacagatctacagtttgctgttgag
gcatggtttgtgggagagaaaattggtgaaggaattggtaaaacaagaagggaagcgcag
cgacatgctgctgaaggttctataaagaatttggctaatgtttacgtatcgcgttgtaag
accgactcgacgtctgcaaacgatatgaacaaatttcctaacgacaatggatctggaaaa
cgaatgagaacggacttccacgggaatcttccaaaacctaaatga
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