Cucurbita pepo subsp. pepo (vegetable marrow): 111804233
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Entry
111804233 CDS
T05351
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111804233
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111804233
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111804233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_IFT122_C
zf-RING-like
FANCL_C
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
111804233
NCBI-ProteinID:
XP_023544734
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All DBs
Position
LG10:2075613..2076613
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AA seq
211 aa
AA seq
DB search
MSITNSRRLLLPAVTASPPVSAQLRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCAL
RCSSLLATMSGGLGGGILAVHPKGVRRNVLKKFPTVEYPKEGNKLRGIDGECVICLSEFE
GGDRVRVLPKCYHGFHVHCIDKWLSSHNSCPKCRNCLTDSCHKIAAGGSQEAPDGEFIAI
DPPPPPPPGEEVVVNVVIAPVEREGLVCNYR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcactaattcaaggaggcttctccttcccgccgtgaccgccagtccgccggtg
tcagcgcagctgcgacctgggttcgggagctttgacatgaacgtagtgatggtcctttcg
gttctcctctgtgctctagtttgctctctgggtctcaacgcgatcctaaaatgcgcgttg
cggtgttccagtttgttggcaacgatgtcgggtggacttggcggtgggattttggcggtg
catccgaaaggtgttcgacgaaatgtcttaaagaaatttccgacggtggaatacccaaaa
gaggggaataaattaaggggaatcgatggggaatgcgtgatttgtttgtcggaattcgag
ggtggggatcgggttcgtgtattgcccaaatgctaccatggcttccacgttcattgcatt
gataaatggctgagttcccataattcttgccccaagtgccgcaattgcctcactgacagt
tgccataagatcgccgctggaggcagccaggaggcgcctgacggcgagttcatcgctatt
gacccgccaccgccgccacctccgggggaggaagtggttgtgaatgttgttattgctccg
gtggaacgggaaggcttggtgtgcaactataggtaa
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