Cucurbita pepo subsp. pepo (vegetable marrow): 111804239
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Entry
111804239 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111804239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111804239
03036 Chromosome and associated proteins [BR:
cpep03036
]
111804239
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111804239
Coactivators
SAGA/TFTC/STAGA complex
111804239
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111804239
STAGA complex
111804239
TFTC complex
111804239
SAGA complex
111804239
SLIK complex
111804239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111804239
NCBI-ProteinID:
XP_023544738
LinkDB
All DBs
Position
LG10:complement(1634723..1641126)
Genome browser
AA seq
511 aa
AA seq
DB search
MDSSTQSPSEPPAASSPHPPPATTVSSATTSVAAPPQSSPNANPNINPSSFQNQNPNSKA
STPLPNQPSQQQQSLPTSQQVTRPSTALSGTWQPPSHFSHFSSPSPSASSGVPSPRPVAA
SSPAQRGGIAIGVPAHQPTPSPQPASFSASYGQHFGGLGRGGVSMSEPASNATPSQVRPP
MQGMQGLGMLGSSGSSSHMPQRPVQSSLRMPSTPNSTAQNFQGHGLLRVPSASSPSSSLP
NTSQGMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPALQQRSHIPQQQNHPLIPASQQQQ
ISSTPQQQPAQSHQQQEHFAQQFQPSRSSQGLPHQQQAARAQGPANPKASPLAPSQTSNT
QTMSQSRAVSAETEEPCSRILSKRSIGELVNQIDPSERLDPEVEDLLVDLAEEFVESITT
FGCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFCSDEIKIFRKPLTNDTHRERLAAVKK
SIVASEMASTRSSAGQAAGNTKSSLAKTPAV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcgacacagtcaccgtccgaacctccggcagcctcttctcctcatccacct
ccagctacaacagtctcctccgccacaacttccgttgcagctccaccgcaatcatcccca
aatgcaaaccctaatatcaatccgagttcattccaaaatcagaaccccaattccaaggcc
tcaactcctctgcccaaccagccgtcacaacagcaacagtctctccccacttcacagcaa
gtaactaggccttccaccgcattgtctggaacttggcaaccgccctcgcatttctctcat
ttttcttctccttcgccttctgcttcgtctggagttccttcacctcgccctgttgctgct
tcttctccagcccaaaggggcggcatcgccattggggttccagctcaccagccaactcct
tctcctcagcctgcttcattttctgcatcttatggccagcactttggtgggttgggccga
ggtggcgtcagcatgtcggaaccggcctccaatgcaactccttcccaggtgagacctcct
atgcaaggaatgcagggtttgggaatgttgggatcaagtggttctagttctcatatgccg
cagagaccagtgcaatcctctctcaggatgccatctaccccaaactcaactgcccaaaac
ttccaaggccatggactcttgagagttccatcagcaagttctccaagttcttcattgcca
aacacatcacaaggtatgcaaccctccaatcagccatggttgccatctacctcacaagga
aaaccaccacttccaacaccttcatatagaccacaggcaaactcacctgctttgcaacaa
agatcacatatccctcaacaacagaaccatcccttaattccagcttctcagcaacagcaa
atttcatcaacccctcagcaacaacctgcacaatcacatcagcagcaagagcattttgca
caacagtttcaaccatcaaggagttcacaaggcttaccacatcaacaacaggctgcaaga
gctcaggggccagcaaacccgaaggcttctcctcttgcaccttcacaaactagtaataca
cagacaatgtcccagagcagagctgtaagcgcagaaactgaagaaccctgtagtagaatt
ctcagcaaaagaagtattggcgaattggttaaccagattgatccatctgaaagattggat
cctgaagtggaagatttacttgttgatctagcagaagagtttgttgaatcaattacgaca
tttggttgctcattagcaaagcatcgcaaatcaaccacattggaagcaaaagacatcctt
ctacatcttgaaaaaaactggaatataacacttcctgggttttgcagtgacgagattaag
atattcagaaaaccgcttacaaatgatactcatagagagcgtcttgcagcagtcaaaaag
tctattgtggcaagtgagatggcaagtaccaggagttctgccggacaggccgctggaaat
accaaaagcagtctggcaaaaacacctgcagtttag
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