Cucurbita pepo subsp. pepo (vegetable marrow): 111804298
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Entry
111804298 CDS
T05351
Name
(RefSeq) auxin response factor 18-like isoform X1
KO
K14486
auxin response factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111804298
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
111804298
NCBI-ProteinID:
XP_023544817
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Position
LG10:complement(1241922..1245409)
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AA seq
665 aa
AA seq
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MITFMDSKEKSKEMDKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHACASPVDFRT
CPKLPSYTLCRVSAIKFLADPDTDEVFAKLRLIPINGSELDFDDGIGRLNGSEQDKPTSF
AKTLTQSDANNGGGFSVPRYCAETIFPPLDYSADPPVQTILAKDVHGETWKFRHIYRGTP
RRHLLTTGWSSFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGAGDGPDSSCGWNGAVP
YGAFSANESLMGKGKVKAKSVIEAATLAANGQPFEIVFYPRASTPEFCVKAALVKAALQI
RWCSGMRFKMAFETEDSSRISWFMGTVNSVQVADPLRWPESPWRLLLVTWDEPDLLQNVK
RVSPWLVESVSNMSPIHIAPFSSPRKKLRYPQHPDFPLDNQPPMPLFSSYLHGSGSPFGC
PPDNNSAGMQGARHAHFGLSLSDFHLSKLHSGLFPIGYRSPDPAAESATLSCNAMTEKPS
MSENVSCLLTMAHSTQASKKCDGVKTPQLILFGRPILTELHMSQTYSGDTVSSVGTGNSS
PDGNGDRTEKRVDGSGSSLHQQRPLEGSSCENFQCYKDDRQEVEPNVDPGHCKVFMESED
VGRTLDLSSLGSYEELYTKLGNMFDIDNSETLNHVLYRDVSGAVKHVGDEQFSDFIKTAR
RLTIL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgattacgtttatggattccaaagagaaatcgaaggagatggacaaatgtttagatcct
cagctatggcatgcctgtgcgggaggaatggttcaaatgccgccggtgaacgccagggtt
ttctattttcctcaaggccatgccgagcatgcttgtgcctccccagttgatttcaggact
tgtccgaagcttccttcatataccctttgcagagtctctgctatcaagttccttgcggat
cctgacaccgatgaggtctttgccaaacttaggttgatacccataaatggaagtgaacta
gattttgatgatggaattgggcggcttaatgggtctgaacaggataagccaacttcgttt
gcaaagacactgactcagtctgatgctaacaatggagggggtttctctgttccaaggtat
tgtgcagaaaccatcttccctccgttggattactctgctgatccgcctgttcagaccatt
cttgctaaggatgttcatggcgagacatggaaattcaggcacatttatagggggacacct
cggcggcatcttttgaccactggttggagtagttttgttaaccataagaagcttgttgcg
ggggattccattgtgttcttgagggctgaaaatggtgatctctgcgtcgggattaggcgg
gcgaaaaggggagctggagatggtccagactcgtcgtgtggatggaatggtgcagtccct
tatggagctttctctgctaatgaaagtcttatgggaaaggggaaagtgaaggctaaatca
gtaattgaagctgctacacttgctgcaaatgggcagccatttgaaatagtattctatcca
agagctagcactcctgaattctgtgtcaaggcagcactggtgaaagcagcattgcagatc
cggtggtgctcaggtatgaggttcaagatggccttcgaaaccgaggactcgtctcgtatt
agctggttcatggggaccgtcaattcggttcaggtcgctgacccactacgctggccggag
tcaccatggaggcttcttctggttacttgggacgaaccagatttacttcagaatgtgaaa
cgcgttagcccgtggttggtcgaatcggtatcgaacatgtctcccatacacattgcccca
ttctcatctccaaggaaaaagctcagatatccacaacaccctgatttccccctcgataac
cagcctcctatgccattgttctctagttatctccacggttccggcagcccttttggttgt
cctcccgacaacaactctgctggcatgcagggagccaggcatgctcattttggtctatcc
ttatcagattttcatctcagtaaactgcactcaggtttgtttccgattggttatcgatca
cccgatccagctgctgagtcagctacactttcttgtaatgcaatgactgaaaagccaagt
atgagtgaaaatgtatcttgcttgctaaccatggcacattctactcaagcctcgaagaaa
tgcgacggcgtaaagactcctcaactaatactttttggtcgacccatacttaccgaattg
catatgtctcaaacctactccggcgatactgtttcctcggttggtactggaaatagctcg
ccagatggaaatggagatagaacagagaaacgtgttgatggttctggatcttctctgcat
caacaacgtccattggaaggctcgtcttgcgaaaatttccaatgttacaaggacgatcgg
caagaagtcgagcctaacgttgatccaggccattgtaaagtcttcatggaatcagaagat
gtaggtcgcacccttgatctttcttcacttgggtcttatgaagaattgtacacaaaactt
ggaaacatgtttgatatagataactcagagacattgaaccacgttttgtaccgtgatgtt
tccggtgctgtcaagcacgtcggtgacgaacaattcagcgacttcatcaaaacagcaaga
agattgacaattctatag
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