Cucurbita pepo subsp. pepo (vegetable marrow): 111804299
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Entry
111804299 CDS
T05351
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
111804299
04980 Cobalamin transport and metabolism
111804299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111804299
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111804299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
111804299
NCBI-ProteinID:
XP_023544821
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Position
LG10:complement(5376495..5382090)
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCVIVFIFNVYLLINYQHPDDKNQAYFPKFVVVFGLSIALISILML
PADVANRQACKHALYNGACNLTLPMKDLWLAIYIVDALLVFFIIPFAMFYYEGDQDKGIG
ERMKSAMIWVVVMAIVCALLLGILYGFVGEVDFTVMHLSSNTASFPNSWEFSSSQPCIGN
GAHQCSAFTANASSEKTWTMRTTFPEYVVALATIVGSVLFSVXGGVGIACLPLGLIFSFV
RRPKAVITRSQYIKEATDLGKKARELKKAADSLHQEERSGSKGRKWRKNVKAVEKELLQL
EEDVNLLEEMYPQGEKAETAWALTVLGYLAKLVLGVLGLIVSVAWVVHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCSTAFAYYARATAAQEIFGHTLQSLRGIRYLYKYNVFQIAF
VALAGLTFAYYAAFGWRRKKPSGRFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaatctcgctctcgtaatcgtcgctattgtcgtctgtgtgattgtattc
atcttcaatgtgtaccttctgattaattatcagcatcctgatgacaagaaccaggcgtat
tttcctaaatttgtcgttgttttcggtctgtctattgcgttgatatccattttgatgtta
ccggccgacgtcgctaaccgacaggcatgcaagcacgctttgtataatggtgcatgtaac
cttacattgccgatgaaggatctatggctcgctatctatatcgtcgatgctcttctcgtc
ttcttcattattcctttcgccatgttctactacgaaggagaccaggacaagggcattggg
gaacggatgaaaagcgccatgatatgggttgtggtaatggccattgtctgtgctctcctg
ttgggaattttatacgggttcgttggagaagttgactttactgttatgcatctctcttca
aacactgcttcttttccgaattcatgggagttctctagcagccaaccgtgcattggaaat
ggtgcccaccagtgttcggcattcacggcaaatgcttcatcagagaaaacgtggacaatg
cgcactacttttcccgaatatgttgttgctcttgccactattgttggatccgtactcttc
tctgtatntggaggtgttggcattgcttgtctgcccttgggcctcattttctcatttgtt
aggcgtccaaaggctgttatcactcgttcacagtatatcaaggaagcaacagatttggga
aaaaaggcaagagaactgaagaaagctgctgattcactccatcaagaagaaagaagtggt
tctaagggtagaaaatggcgaaagaatgtgaaggctgtagagaaggagttgcttcaattg
gaagaagatgtaaatcttttagaagagatgtacccacagggagaaaaggcggagactgca
tgggcattgaccgttcttggctacttggcaaaacttgtgttgggagttttggggttgatt
gtttcagtggcctgggttgtacatatcattatatatctgctagttgatcccccgctgtct
ccttttctaaatgaagtttttatcaagctggatgatgtttggggtcttcttggaactgca
gcatttgcattcttctgcttctaccttcttctagcagtgattgcgggagccatgatgctt
ggcttgagactagtttttatcacaattcatcctatgaagtggggagccacactgatgaac
tctttcctgtttaatgtggggctcatcctcctatgctctatcagtgtgattcaattttgc
tccacggcatttgcgtactatgcacgagcaactgcagcacaagaaatctttggacacaca
ttgcagtctcttcgcggtatcagatatttgtacaagtataatgttttccaaatagcattc
gttgcgttggcaggattgaccttcgcgtattatgctgcctttggatggagaagaaaaaag
ccttctggcaggttccagctctcctcgtaa
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